TCONS_00021268-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021268-protein
Unique NameTCONS_00021268-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length464

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021268-protein ID=TCONS_00021268-protein|Name=TCONS_00021268-protein|organism=Clytia hemisphaerica|type=polypeptide|length=464bp
MKIHKNFRNRIHRASGTSIQLLNSKLTDTGNWECDIIFTYRKGNEIKERK
RVKTLANYDVIIVSPPTIKHVYPLSVSAPLTYKKEAICEAYSPNPFTLTW
IKIHGNFTKDTVMDIQENFANNQYKKRNIITFNSLSVNDIGQYLCVAKNI
AGQVSREVEVNVEAKPMMLVPKPRVHVNIGQSVELKCVAMGYPKVSFEWL
FTHNYEQIQLIPTTKKGDFSVSRTRFQYYDGKERSTSVLRIENVTPKHWG
TYRCQAENKIGYAEAKFTIEGHSIPDAPALLNTEDIGKHHITLLWLLDKA
NGQIKSIFIEKRQIGQKEWDRVEVHKAITKYTFSNLDEDTLFEFRLRATN
VVGTSAYSEIQKLRTNKTPIVAKSSKKDTPKEESKTKNIIFGLDIIALTA
IGGGILILITCVCAVGIIVVQRKKFRSQKKRKSTEKKTLIQMNRPLSFEF
CGTRVRYFHQHGRQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011903XLOC_011903Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021268TCONS_00021268Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 73..163
e-value: 8.2E-4
score: 28.7
coord: 172..270
e-value: 3.0E-8
score: 43.4
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 85..152
e-value: 4.0
score: 1.4
coord: 178..261
e-value: 9.0E-13
score: 58.4
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 275..355
e-value: 1.3E-5
score: 34.6
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 276..358
e-value: 3.2E-9
score: 36.9
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 277..368
score: 15.401
IPR003961Fibronectin type IIICDDcd00063FN3coord: 275..365
e-value: 6.65097E-13
score: 63.6695
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 266..368
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 272..391
e-value: 2.0E-14
score: 53.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 160..270
e-value: 9.8E-19
score: 67.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 66..159
e-value: 1.1E-11
score: 44.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..65
e-value: 0.28
score: 10.5
NoneNo IPR availablePFAMPF13927Ig_3coord: 165..258
e-value: 1.4E-13
score: 51.1
NoneNo IPR availablePIRSFPIRSF000615TyrPK_CSF1-Rcoord: 2..288
e-value: 6.0E-15
score: 52.3
NoneNo IPR availableCDDcd00096Igcoord: 183..268
e-value: 1.1484E-10
score: 56.7287
NoneNo IPR availableCDDcd00096Igcoord: 88..159
e-value: 7.36194E-7
score: 45.5579
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 66..161
score: 8.466
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 166..270
score: 11.624
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 63..166
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 165..276

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021268-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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