TCONS_00021219-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021219-protein
Unique NameTCONS_00021219-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length933

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021219-protein ID=TCONS_00021219-protein|Name=TCONS_00021219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=933bp
MMISNNHYANEKASQEAKFYVEKEEPLQESWDKLFNNDNFLQKLQKSSLD
GYLGASHFRSVCWRIFWECLSETPSKWKDEVKEKRDWYSGIRKKYVINPH
QEEQKEIDLEKHHPLSLAEDSIWNKYFQDNELRTLILQDLDRLHPEIEFF
QQEEIKKYLLHILFCYARENPQVSYKQGMHEILSPLIYVMYTNCTAIKNT
KESISEDVKNIVDFEFIEHDAYLLFYNIMESIQPWYVDLRPIEAPPTQQQ
QSLKNHGSSGMFQKPDSKPVNAISNKLQLIQGSMLQKYDPDLAAHLKKMS
VTPQVYGIRWVRLLFGREFSMDGLLVLWDAIFADGMALELVEYIYLAMLM
HLKAVLLQSDFSQCLSYLMKFPQDIDPKLILRRAVELKQMKNKPMHQHRQ
QQQTHHPLNSPKISSTATGSRQNKRHPQQQPQQPTTSRHQQHKQKQGGGG
MGVKIKPSIHPVRYRLGETEEHMYAQALGSGGPSVAYKASKNQQDGSRSN
FFVEDAPDGGQDDHRIQETSQTVKAEFSKGEPHHHGNKLNAGMVGNLRER
MGSGAQIISRIPNTLRDAMNSPKHLSNQSIGQQSGVSSAGAGGGSNNSYI
NAIIEDHTRLQRQVSELKSDLDSAQAMVLYCSQRMEHYLNVMQERMFQEE
NFVDEIAILGFAGLKQVREILKGQDMDDVDFTDIDRHIGVARERDASKNH
DSQDGKKDGLPVAVLADFNHYDDKDDEIQSDETKDLSKKIAESADPVEKQ
TPENENLDMKLNTEIENYSSEMPLRNVFQNETQSNVSTEISIDEDSNIET
PTTVNIEEESNPEDIIVGDNHTLNSNVLESSGNPLSESPGDIGDHIQALG
DITHELEVSDKADDRVEIDLETGTTGDDESSSSINPDPLSTLVDEGSESV
KMVGNSKSEVDKSSTGWVDPLQSSDPLNSDTDA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011873XLOC_011873Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021219TCONS_00021219Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 600..627
NoneNo IPR availableGENE3D1.10.8.270coord: 12..230
e-value: 1.9E-22
score: 79.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..458
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 824..844
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 860..933
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..752
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 50..360
e-value: 7.3E-53
score: 191.6
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 276..356
e-value: 2.3E-12
score: 47.0
coord: 124..236
e-value: 2.4E-10
score: 40.4
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 53..335
score: 27.402
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 119..237
coord: 56..92
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 279..388

Blast
[Close]
BLAST of TCONS_00021219-protein vs. Swiss-Prot (Human)
Match: TBCD5 (TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 4.722e-99
Identity = 152/370 (41.08%), Postives = 247/370 (66.76%), Query Frame = 0 
Query:   28 QESWDKLFNNDNFLQKLQKSSLDGYLGASHFRSVCWRIFWECLSETPSKWKDEVKEKRDWYSGIRKKYVINPHQEEQKEIDLEKHHPLSLAEDSIWNKYFQDNELRTLILQDLDRLHPEIEFFQQEEIKKYLLHILFCYARENPQVSYKQGMHEILSPLIYVMYTNCTAIKNTKESI--SEDVKNIVDFEFIEHDAYLLFYNIMESIQPWYVDLRPIEAPPTQQQQSLKNHGSSGMFQKP-DSKPVNAISNKLQLIQGSMLQKYDPDLAAHLKKMSVTPQVYGIRWVRLLFGREFSMDGLLVLWDAIFADGMALELVEYIYLAMLMHLKAVLLQSDFSQCLSYLMKFPQDIDPKLILRRAVELKQMKNKP 394
            ++ W++LF N+N+L  +++  ++G L +S FRS+CW++F   L +  S+W   ++E R WYS I++ ++ NP +   ++ DL  ++PLS  E S+WNK+FQD ELR++I QD+ R  PE++FFQQE ++K L  +LFCYAREN Q+ YKQGMHE+L+P+++V++ +  A  +  ES   SE++K +++ E++EHDAY +F  +ME+ +PW+             Q+  +   +   F +P D  P  AI  K+  IQ  +L+K+D +L  HL ++ + PQ+YG+RWVRLLFGREF +  LLV+WDA+FADG++L LV+YI++AML++++  L+ S++  CL  LM +P   D   ++ +A+ L+  K  P
Sbjct:   56 RKEWEELFVNNNYLATIRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISRIEELRAWYSNIKEIHITNPRKVVGQQ-DLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFLHASESAQPSEEMKTVLNPEYLEHDAYAVFSQLMETAEPWFSTFE------HDGQKGKETLMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGLSLGLVDYIFVAMLLYIRDALISSNYQTCLGLLMHYPFIGDVHSLILKALFLRDPKRNP 418
The following BLAST results are available for this feature:
BLAST of TCONS_00021219-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCD54.722e-9941.08TBC1 domain family member 5 OS=Homo sapiens GN=TBC... [more]
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