TCONS_00021143-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021143-protein
Unique NameTCONS_00021143-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length163

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021143-protein ID=TCONS_00021143-protein|Name=TCONS_00021143-protein|organism=Clytia hemisphaerica|type=polypeptide|length=163bp
MAEKPEDLNLPTAIVGRLIKEVLPEGINISKEARAAISKSASVFVLYATS
CANALAMKHKRKTLTANDVLDAMEEMEFPSFIEPLKDGLEVFKREQKGKK
DAAELKRKQKESEKKDTMKKQREDGEIVPEGDENTPVSENSAPLETLEEG
GEPEESAPVAMES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011843XLOC_011843Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021143TCONS_00021143Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046982 protein heterodimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..120
NoneNo IPR availableGENE3D1.10.20.10coord: 1..98
e-value: 1.6E-23
score: 82.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..163
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 9..73
e-value: 5.2E-11
score: 42.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 6..121

Blast
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BLAST of TCONS_00021143-protein vs. Swiss-Prot (Human)
Match: DPOE3 (DNA polymerase epsilon subunit 3 OS=Homo sapiens GN=POLE3 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 9.529e-53
Identity = 75/104 (72.12%), Postives = 91/104 (87.50%), Query Frame = 0 
Query:    1 MAEKPEDLNLPTAIVGRLIKEVLPEGINISKEARAAISKSASVFVLYATSCANALAMKHKRKTLTANDVLDAMEEMEFPSFIEPLKDGLEVFKREQKGKKDAAE 104
            MAE+PEDLNLP A++ R+IKE LP+G+NISKEAR+AIS++ASVFVLYATSCAN  AMK KRKTL A+DVL AMEEMEF  F+ PLK+ LE ++REQKGKK+A+E
Sbjct:    1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASE 104
The following BLAST results are available for this feature:
BLAST of TCONS_00021143-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPOE39.529e-5372.12DNA polymerase epsilon subunit 3 OS=Homo sapiens G... [more]
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