TCONS_00021116-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021116-protein
Unique NameTCONS_00021116-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length221

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021116-protein ID=TCONS_00021116-protein|Name=TCONS_00021116-protein|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
GILMIVSWVIFATIGIFMARYMKQATKDQKINGKQAWFPIHQMFMLLCVI
CFLIGFILIFVEKAGWVESAGTHGQLGLVVVILGLIQPLMAMVRCAPDSE
KRFIFNWFHRTFGMSAWIIGGVCIIFAFDKILQESYTEMLVFMIVVVVLF
ILLDIVICASSKNSASADVAYRAKSDSVDVQNTSSASNTTIPTIFCVVVA
LFAAAMGIYHVYIIGTYNDGN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011832XLOC_011832Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021116TCONS_00021116Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006593Cyt_b561/ferric_Rdtase_TM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006593Cytochrome b561/ferric reductase transmembraneSMARTSM00665561_7coord: 1..128
e-value: 2.3E-25
score: 100.3
IPR006593Cytochrome b561/ferric reductase transmembranePFAMPF03188Cytochrom_B561coord: 2..128
e-value: 3.9E-9
score: 36.7
IPR006593Cytochrome b561/ferric reductase transmembranePROSITEPS50939CYTOCHROME_B561coord: 1..162
score: 26.191
NoneNo IPR availableCDDcd08760Cyt_b561_FRRS1_likecoord: 1..157
e-value: 6.20743E-29
score: 107.431

Blast
[Close]
BLAST of TCONS_00021116-protein vs. Swiss-Prot (Human)
Match: FRRS1 (Ferric-chelate reductase 1 OS=Homo sapiens GN=FRRS1 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.916e-22
Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 0 
Query:    1 GILMIVSWVIFATIGIFMARYMKQATKDQKINGKQAWFPIHQMFMLLCVICFLIGFILIFVEKAGWVESAGTHGQLGLVVVILGLIQPLMAMVRCAPDSEKRFIFNWFHRTFGMSAWIIGGVCIIFAFD 129
            G LM V+W+   +IG+ +AR+ K       + G+ AWF +H+M M    +   I F++ F+ + GW   AG H  LG +V+ L ++QPL+A+ R      +R +FNW H + G +A II    +    D
Sbjct:  374 GALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAFVMPFIYRGGWSRHAGYHPYLGCIVMTLAVLQPLLAVFRPPLHDPRRQMFNWTHWSMGTAARIIAVAAMFLGMD 502
The following BLAST results are available for this feature:
BLAST of TCONS_00021116-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FRRS11.916e-2234.11Ferric-chelate reductase 1 OS=Homo sapiens GN=FRRS... [more]
back to top