TCONS_00021082-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021082-protein
Unique NameTCONS_00021082-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length773

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021082-protein ID=TCONS_00021082-protein|Name=TCONS_00021082-protein|organism=Clytia hemisphaerica|type=polypeptide|length=773bp
MHGRVTLAKNIQRKMLDILFTCQNLDQNEDVKNQVTKLFKLLNTTSSEIL
VHIQILLKIKKELNFAKLDLQRSSSSGNNESKEYKRVKWLESRLDYISTL
CHEKCASLDGSMRQEIIRIESGDSDVIDTVQPFLSQMTRDSIIESCYCRR
LTSVEKAMVQNLRDELQDNPSLTTLSSDSKFSESSITKLESSGINLKESS
EAKSPEQAVVSSLKSFEEYQDATLGNLVAKFQKFFNENEDGTLSKKNTFT
KSVTFDRRITKNFTGSESNRSGRSSNFGYNYSSTCQSPQSLQLGVNVKAK
VQEKPSFFSHLPRITEDIPTEKEDKSKVYPRSPVVWCDKGQEMNKIQRTV
KPRKKGKSLSPAFQDLKTSQTEEELEEKRKIAKRTVMVRIKAVNKLKGLK
KKNITQRELDKFKAAHLSRLCGPDGLKSDNNNIAIDAAKSAGALLNPNKE
LIALLKETVRDEGKVWLLRYESAKALLHLEIWDAQCMEFLASTLISGNAQ
VKLDLLETIRETRNGKFLHKNDGSMLPLRHSLVSTMKDGSLDLEVRVEAA
LALAHLCIKNSYSKELLLKTLDSENEKLKSRGLSALVKQLNIRNEKILQG
IMDQLKSAIGWKIRMQASLLLQKFSLQEIEKFGDESLFDCLHELLWNHPS
QEFRRSIASLVERFGMKDDVYKLVLRKLEDRDESVRAEGIISLATLQVKT
ERELKILLDILELDSSTYVRAQVIRTFVALQWVHPRVIRALQERQRNNAD
FLSEEAEKALKVLLACTPKSPSP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011814XLOC_011814Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021082TCONS_00021082Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 409..561
e-value: 1.4E-6
score: 27.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 563..771
e-value: 3.8E-12
score: 45.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..371
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 425..760

Blast
[Close]
BLAST of TCONS_00021082-protein vs. Swiss-Prot (Human)
Match: HEAT9 (Protein HEATR9 OS=Homo sapiens GN=HEATR9 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.833e-17
Identity = 78/322 (24.22%), Postives = 153/322 (47.52%), Query Frame = 0 
Query:  425 GLKSDNNNIAIDAAKSAGALLNPNKELIALLKETVRDEGKVWLLRYESAKALLHLEIWDAQCMEFLASTLISGNAQVKLDLLETIRETRNGKFLHKND--------GSMLPLRHSLVSTMKDGSLDLEVRVEAALALAHLCIKNSYSKELLLKTLDSENEKLKSRGLSALVKQLNIRNEKILQGIMDQLKSAIGWKIRMQASLLLQKFSLQEIEKFGDESL-FDCLHELLWNHPSQEFRRSIASLVERFGMKDDVYKLVLRKLEDRDESVRAEGIISLATLQVKTERELKILLDILELDSSTYVRAQVIRTFVALQWVHPRV 737
             L+S   +    AA++ G L   +K ++  L++  +   +   ++YE+ + L  L   +   +  L   L   N   +++ L  +R   N       D        G ++P+  +L+   K  S   E  +EAAL L  L   ++  +E LL+ L    +  + + L  LVK +++ +  +++ I+DQL S+   + R +A+ +L+   L++I+  G E L F+ L     N P    R+++A  VE   +K  +  LV  +L + D + R E +ISL  L +++ +   +LLD+L+ ++   V+  +  T +    + P +
Sbjct:  156 SLESPREDEQFYAAQALGCLRISDKFVMEALQQVAQTGPEK--VKYEAYRTLAILGCLNKHVIRALIKQLKEKNEGQRMETLTGLRMALNSWAAVSKDKRTQVGDEGKLVPVLQTLIK--KSSS---EASLEAALCLGFLRPCSNMVQEFLLQCLCQGLKTQRMKALRMLVKVMHVHSAPVIKAILDQLCSSSVLEDRFEATQMLKTIGLEQIQAQGLEELTFNLLRRKTHNEPFLAVRQAVAQTVEELKLKPTMMNLVEAQLMNPDATARQEAVISLGVLGIRSPQVFHLLLDLLDAENHQAVKKSLQETLILCASIDPWI 470
The following BLAST results are available for this feature:
BLAST of TCONS_00021082-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEAT94.833e-1724.22Protein HEATR9 OS=Homo sapiens GN=HEATR9 PE=1 SV=2[more]
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