TCONS_00021064-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021064-protein
Unique Name	TCONS_00021064-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	326

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021064-protein ID=TCONS_00021064-protein|Name=TCONS_00021064-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MSEAIYWCILTCVSAIFICSHIEGLHPSGEKDCELDHSDCRDCYNESGIQ
FCQCKQGFVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYT
GDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTGDGKHCY
DLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAM
NQNFTYCPQYHSCINKDGGYGCECLVDNCHPDRVEPKTTSSQKLKYVIIG
SSTVAGCIILIVAVTFVVIKCKRKRNTRKRGPEISPSKTKTERYKTLTEN
VTRSPEGIRLNDFSNPLSIITSINMK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011810	XLOC_011810	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021064	TCONS_00021064	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001881	EGF-like_Ca-bd_dom
IPR000742	EGF-like_dom
IPR018097	EGF_Ca-bd_CS
IPR000152	EGF-type_Asp/Asn_hydroxyl_site
IPR013032	EGF-like_CS
IPR009030	Growth_fac_rcpt_

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001881	EGF-like calcium-binding domain	SMART	SM00179	egfca_6	coord: 67..107 e-value: 3.5E-10 score: 49.8 coord: 109..150 e-value: 0.035 score: 13.6 coord: 151..193 e-value: 3.5E-5 score: 33.2 coord: 194..230 e-value: 0.055 score: 12.0
IPR001881	EGF-like calcium-binding domain	PFAM	PF07645	EGF_CA	coord: 151..192 e-value: 2.4E-8 score: 34.0 coord: 194..224 e-value: 1.6E-5 score: 24.9 coord: 109..149 e-value: 5.6E-5 score: 23.2 coord: 67..106 e-value: 3.7E-10 score: 39.7
IPR000742	EGF-like domain	SMART	SM00181	egf_5	coord: 154..193 e-value: 32.0 score: 10.2 coord: 32..66 e-value: 96.0 score: 4.8 coord: 111..150 e-value: 0.0023 score: 27.2 coord: 70..107 e-value: 1.6E-5 score: 34.4
IPR000742	EGF-like domain	PROSITE	PS50026	EGF_3	coord: 67..107 score: 16.735
IPR000742	EGF-like domain	PROSITE	PS50026	EGF_3	coord: 151..189 score: 10.128
IPR000742	EGF-like domain	PROSITE	PS50026	EGF_3	coord: 108..150 score: 13.594
IPR000742	EGF-like domain	PROSITE	PS50026	EGF_3	coord: 194..230 score: 7.14
None	No IPR available	GENE3D	2.10.25.10		coord: 74..108 e-value: 6.2E-16 score: 58.0
None	No IPR available	GENE3D	2.10.25.10		coord: 32..73 e-value: 7.9E-7 score: 28.6
None	No IPR available	GENE3D	2.10.25.10		coord: 148..175 e-value: 3.1E-7 score: 29.7 coord: 194..215 e-value: 1.4E-5 score: 24.4
None	No IPR available	GENE3D	2.10.25.10		coord: 216..233 e-value: 0.12 score: 11.8 coord: 176..193 e-value: 1.3E-9 score: 37.2
None	No IPR available	GENE3D	2.10.25.10		coord: 109..147 e-value: 7.5E-10 score: 38.2
None	No IPR available	GENE3D	1.20.5.900		coord: 242..291 e-value: 2.2E-4 score: 20.6
None	No IPR available	CDD	cd00054	EGF_CA	coord: 151..187 e-value: 0.00735746 score: 32.6086
None	No IPR available	SUPERFAMILY	57196	EGF/Laminin	coord: 144..195
IPR018097	EGF-like calcium-binding, conserved site	PROSITE	PS01187	EGF_CA	coord: 194..222
IPR018097	EGF-like calcium-binding, conserved site	PROSITE	PS01187	EGF_CA	coord: 67..93
IPR000152	EGF-type aspartate/asparagine hydroxylation site	PROSITE	PS00010	ASX_HYDROXYL	coord: 168..179
IPR000152	EGF-type aspartate/asparagine hydroxylation site	PROSITE	PS00010	ASX_HYDROXYL	coord: 213..224
IPR000152	EGF-type aspartate/asparagine hydroxylation site	PROSITE	PS00010	ASX_HYDROXYL	coord: 84..95
IPR013032	EGF-like, conserved site	PROSITE	PS01186	EGF_2	coord: 93..106
IPR009030	Growth factor receptor cysteine-rich domain	SUPERFAMILY	57184	Growth factor receptor domain	coord: 29..150

Blast

[Close]

BLAST of TCONS_00021064-protein vs. Swiss-Prot (Human)
Match: FBN1 (Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 7.160e-33
Identity = 89/209 (42.58%), Postives = 114/209 (54.55%), Query Frame = 0

Query:   32 DCELDHSDCRD---CYNESGIQFCQCKQGFVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYTGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGL--TGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCECLVD-NCHPDRV 234
            +CE+   +C     C N +G   C C  G++GDG  C D DEC+ G++ C Q+A C NT GSYRC C +GYTGDG TCT  DEC   L+ C N   C+N     GY+C C  G   + DGK C D+DEC + P IC     C N  G + C C  GYE D  G  C D++EC    + T C    +C+N  G Y C+C  D   +P RV
Sbjct: 1325 ECEIGAHNCGKHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSQHADCKNTMGSYRCLCKEGYTGDGFTCTDLDECSENLNLCGNGQ-CLNAPG--GYRCECDMGFVPSADGKACEDIDECSL-PNICV-FGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECL---DPTTCIS-GNCVNTPGSYICDCPPDFELNPTRV 1524

HSP 2 Score: 118.242 bits (295), Expect = 3.214e-29
Identity = 77/199 (38.69%), Postives = 105/199 (52.76%), Query Frame = 0

Query:   32 DCELDHSDCRD--CYNESGIQFCQCKQGFVGDG--YNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYTGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCECLV 226
            +C+L+ + C    C N  G   C C  G+ G      C D +EC  G++ C ++A+C NT GS++CSC+ G+ GDG  CT  DEC  G   CS    C NT  +  Y+C C+EG TGDG  C DLDEC     +C N  +C N  G Y C C  G+     G  C+DIDEC++         + +C N  G + CEC +
Sbjct: 1283 ECDLNPNICLSGTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAHNCGKHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSQHADCKNT--MGSYRCLCKEGYTGDGFTCTDLDECSENLNLCGN-GQCLNAPGGYRCECDMGFVPSADGKACEDIDECSLPNICV----FGTCHNLPGLFRCECEI 1474

HSP 3 Score: 106.686 bits (265), Expect = 2.282e-25
Identity = 79/220 (35.91%), Postives = 109/220 (49.55%), Query Frame = 0

Query:   13 VSAIFICSHIEGLHPSGEK--DCELDHSDCR--DCYNESGIQFCQCKQGFVGD--GYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYT--GDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCEC 224
            V+   +C H  G   +G    +C++ H  CR  +C N+ G   C CK G+  D  G +C D +EC      C  N +C NT GSY+CSC +GY    DGR+C   DEC     +C  + +CVNT  + G+ C C  G T     C D +EC     +C +   C+N  G+++C C  G+  D  G  C+D+DEC  N         H C N  GGY C C
Sbjct: 2384 VAFKKLCPHGRGFMTNGADIDECKVIHDVCRNGECVNDRGSYHCICKTGYTPDITGTSCVDLNECNQAPKPC--NFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNC--QFLCVNT--IGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCECQRGFSLDQTGSSCEDVDECEGNHRCQ-----HGCQNIIGGYRCSC 2592

HSP 4 Score: 93.2041 bits (230), Expect = 8.646e-21
Identity = 78/241 (32.37%), Postives = 108/241 (44.81%), Query Frame = 0

Query:   32 DCELDHSDCRDCYNESGIQFCQCKQGFVGDGYN-CRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGY--TGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDI-----------DECAMNQNFTYCPQYHSCINKDGGYGCECLVDNCHPDRVEPKTTSSQKLKY---VIIGSSTVA 255
            +CE D      C N  G   C+C  GF+    N C D DEC +G+    +N  CINT GS++C CN+GY    DGRTC   +EC L    C+  T C N D    Y+C C  G +   + C D+DEC   P IC  +  C N  G++ C+C  G+     G  C+D+            +C+  ++  +  Q   C  K  G+G     D C     EP     Q   Y   +I+G    A
Sbjct: 1894 ECERDACGNGTCRNTIGSFNCRCNHGFILSHNNDCIDVDECASGNGNLCRNGQCINTVGSFQCQCNEGYEVAPDGRTCVDINECLLEPRKCAPGT-CQNLDG--SYRCICPPGYSLQNEKCEDIDECVEEPEICA-LGTCSNTEGSFKCLCPEGFSLSSSGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWG-----DPCELCPTEPDEAFRQICPYGSGIIVGPDDSA 2125

HSP 5 Score: 88.1965 bits (217), Expect = 3.642e-19
Identity = 70/201 (34.83%), Postives = 97/201 (48.26%), Query Frame = 0

Query:   32 DCELDHSDCRD--CYNESGIQFCQCKQG--FVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGY--TGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEG--LTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCEC 224
            +C+ D   CR   C+N  G   C+C  G     +   C D +EC   ++ C  N  C+N  G Y+C+CN GY  T D   C   DEC +    C  ET C N++    Y+C+CQ G  L  D + C D+DECE  P IC +  +C N  G Y C+C  G+        C D++EC +N N        +C N  G + C C
Sbjct: 1116 ECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACIDINECELSAHLC-PNGRCVNLIGKYQCACNPGYHSTPDRLFCVDIDECSIMNGGC--ETFCTNSEG--SYECSCQPGFALMPDQRSCTDIDECEDNPNIC-DGGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICL---SGTCENTKGSFICHC 1307

HSP 6 Score: 87.4261 bits (215), Expect = 6.836e-19
Identity = 75/219 (34.25%), Postives = 101/219 (46.12%), Query Frame = 0

Query:   18 ICSHIEGLHPSGEKDCELDHSDCRD--------CYNESGIQFCQCKQGFVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGY-TGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEG--LTGDGKHCYDLDECEVYPYIC-PNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCEC 224
            IC +  G+   G  D  +D  +C++        C N  G   C+C  G++  G  C D DEC+ G N C  N  C N  G + C+C +G+  G   TC   +EC      C+    CVNT     Y+C C  G  L  D + C D DECE   + C     EC+N  G Y C+CG GY++   G GC D +EC          +   C+N  G Y CEC
Sbjct: 2110 ICPYGSGII-VGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVG-NPCG-NGTCKNVIGGFECTCEEGFEPGPMMTCEDINECAQNPLLCAFR--CVNT--YGSYECKCPVGYVLREDRRMCKDEDECEEGKHDCTEKQMECKNLIGTYMCICGPGYQRRPDGEGCVDENECQTKPGIC---ENGRCLNTRGSYTCEC 2318

HSP 7 Score: 86.2705 bits (212), Expect = 1.756e-18
Identity = 66/186 (35.48%), Postives = 94/186 (50.54%), Query Frame = 0

Query:   43 CYNESGIQFCQCKQGFVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYTGD--GRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTG--DGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCEC 224
            C N  G   C+C  GF     +C D +ECT+  N C    +C NT GS+ C C +G++ D  G +C   DEC+ G   C +   C N   + GY+C+C +G         C D +EC +  +IC   S C N  G+Y C+C  G++ +    GC+DI+EC   Q     P  + C N +GGY C C
Sbjct: 2500 CVNTIGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCECQRGFSLDQTGSSCEDVDECE-GNHRCQHG--CQNI--IGGYRCSCPQGYLQHYQWNQCVDENEC-LSAHICGGAS-CHNTLGSYKCMCPAGFQYEQFSGGCQDINECGSAQA----PCSYGCSNTEGGYLCGC 2674

HSP 8 Score: 79.7221 bits (195), Expect = 2.499e-16
Identity = 65/169 (38.46%), Postives = 85/169 (50.30%), Query Frame = 0

Query:   32 DCELDHSDCRDCYNESGIQFCQCKQGFVG--DGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGY--TGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEG--LTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKD 194
            +CE +     +C N  G   CQC+ G+        CRD DEC      C+ N  CINT GS+ C CN G+  T DG+ C   DEC +  + C N  +C+N D    +KC C+ G  L  DG++C D++ECE  P IC N   C N  G+Y C C  G      G  C D
Sbjct:  493 ECEKNPCAGGECINNQGSYTCQCRAGYQSTLTRTECRDIDECLQNGRICN-NGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSI-RNMCLN-GMCINEDG--SFKCICKPGFQLASDGRYCKDINECET-PGICMN-GRCVNTDGSYRCECFPGLAVGLDGRVCVD 654

The following BLAST results are available for this feature:

BLAST of TCONS_00021064-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021064-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FBN1	7.160e-33	42.58	Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3	[more]

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TCONS_00021064-protein (polypeptide) - C. hemisphaerica