TCONS_00021008-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021008-protein
Unique NameTCONS_00021008-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length551

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021008-protein ID=TCONS_00021008-protein|Name=TCONS_00021008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
TRLKEDVNSARRFAEELQKTNKQTKAELDQYIRTSKAQDAEVDNLRTENR
RIQAELKTSKTLNGELQSHNNKMQDQMRYLDKDNLSNTITEKSAEGAIRK
LQNEIVELDSRVMSHSKEMSKLRCEKNELEEQVTSLQKKNSILEDNEHQA
VLRVRDSVQMVENALLEREQAVVREQQKSHEVLRLQEAITNLMKQADEQR
KKEVANVKSQMNKQLQQLLADIQDFELEAAEKQVLYEKLQREKGAIEKEL
EKMYIVGPEEVTKSGQVFDELHRRIASIELSRDEHILKVEQMEAAMRRNQ
SKFDNESTVYLSQIAEYKKQVKNLKNDMEQISESRLTLLDEVNGLRKELL
NKCEDNATLDITCASQVSSIQQKLDLKEKEFENRLRACEESHRESLNDLR
EMLADQQKTHSKYREETRTINQNQENTITQLRQESKHMKRRNNDLKNAYN
EVQHKYEQMEKEYLGCHTSLEKMQDLYSESEERADTANTQVYSLMNREKQ
LIQDRKSLNRKVDELKLDLSKSTSRSSPHFGVSTSQSRQQWDDFLNNPDL
M
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011780XLOC_011780Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021008TCONS_00021008Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031887SDCCAG8
Vocabulary: Biological Process
TermDefinition
GO:0007098centrosome cycle
Vocabulary: Cellular Component
TermDefinition
GO:0005813centrosome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007098 centrosome cycle
cellular_component GO:0005813 centrosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 389..462
NoneNo IPR availableCOILSCoilCoilcoord: 182..256
NoneNo IPR availableCOILSCoilCoilcoord: 498..525
NoneNo IPR availableCOILSCoilCoilcoord: 91..146
NoneNo IPR availableCOILSCoilCoilcoord: 7..62
NoneNo IPR availableCOILSCoilCoilcoord: 307..341
NoneNo IPR availableCOILSCoilCoilcoord: 470..490
NoneNo IPR availableGENE3D1.20.5.170coord: 1..73
e-value: 0.0049
score: 16.4
NoneNo IPR availableGENE3D1.20.120.330coord: 418..527
e-value: 4.6E-5
score: 22.6
NoneNo IPR availableGENE3D1.20.5.320coord: 74..164
e-value: 0.0045
score: 16.4
NoneNo IPR availableGENE3D1.20.5.50coord: 258..357
e-value: 0.0038
score: 16.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 519..551
IPR031887Serologically defined colon cancer antigen 8PFAMPF15964CCCAPcoord: 55..518
e-value: 3.3E-7
score: 28.9

Blast
[Close]
BLAST of TCONS_00021008-protein vs. Swiss-Prot (Human)
Match: SCLT1 (Sodium channel and clathrin linker 1 OS=Homo sapiens GN=SCLT1 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 7.029e-45
Identity = 145/488 (29.71%), Postives = 275/488 (56.35%), Query Frame = 0 
Query:   13 FAEELQKTNKQTKAELDQYIRTSKAQDAEVDNLRTENRRIQAELKTSKTLNGELQSHNNKMQDQMRYLDKDNLSNTITEKSAEGAIRKLQNEIVELDSRVMSHSKEMSKLRCEKNELEEQVTSLQKKNSILEDNEHQAVLRVRDSVQMVENALLEREQAVVREQQKSHEVLRLQEAITNLMKQADEQRKKEVANVKSQMNKQLQQLLADIQDFELEAAEKQVLYEKLQREKGAIEKELEKMYIVGPEEVTKSGQVFDELHRRIASIELSRDEHILKVEQMEAAMRRNQSKFDNESTVYLSQIAEYKKQVKNLKNDMEQ-------ISESRLTLLDEVNGLRKEL--LNKCEDNATLDITCASQVSSIQQKLDLKEKEFENRLRACEESHRESLNDLREMLADQQKTHSKYREETRTINQNQENTITQLRQESKHMKRRNNDLKNAYNEVQHKYEQMEKEYLGCHTSLEKMQDLYSESEERADTANTQV 491
              ++L  TN+  +    Q+++T   Q   ++ LR + R+ + EL+ +     EL +    +Q QM+  +KD +S    E++++  +++LQ+ I +L+ R+    +E ++LR E   LE+Q   LQ K + LE+  ++A++R R+S+Q++E A L++ QA++ E+QK  ++ +++E ++  ++ A  + KKEVAN K Q N Q+ +L  ++   ++E AEKQ   E++ +EK A+E+ELEK+Y  G    +   ++ +E+H+R    E S+D+  L++ + E  ++    + + +S+    +I+ Y++ ++ L+N +E        +SE RL L  E   LRKE   L K    A        ++S+++ +  +KE+ FE +LR  E+S+R S+ +LR +LA QQK  ++++EET+ + ++ E  I  L+ E    K    +L +       K  + EK  L       ++Q   S++EERA +A+ Q+
Sbjct:  192 LTKQLHVTNENMEVTNQQFLKTVTEQSVIIEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEKDVVSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQEANQLRTENTHLEKQTRELQAKCNELENERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRFVQDATIRTKKEVANTKKQCNIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKIYREGRGNESDYRKL-EEMHQRFLVSERSKDDLQLRLTRAENRIK----QLETDSS---EEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESLRKIALEA--QKKAKVKISTMEHEFSIKERGFEVQLREMEDSNRNSIVELRHLLATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRLQRRLSQAEERAASASQQL 669
The following BLAST results are available for this feature:
BLAST of TCONS_00021008-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SCLT17.029e-4529.71Sodium channel and clathrin linker 1 OS=Homo sapie... [more]
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