TCONS_00020982-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020982-protein
Unique NameTCONS_00020982-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length107

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020982-protein ID=TCONS_00020982-protein|Name=TCONS_00020982-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp
MQNSQQRHVQVFVRIKPTDKYAVKNIELSSDNKSLTIHAQEDNTTKCMNH
QIADWQYSVDGILHNASQEEVYKKCTANQVTLALNGYNSTIFSYGQTGAG
KTFTMTG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011767XLOC_011767Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020982TCONS_00020982Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 7..107
e-value: 9.3E-25
score: 86.7
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 14..107
e-value: 1.6E-17
score: 63.4
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 8..107
score: 26.943
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..107

Blast
[Close]
BLAST of TCONS_00020982-protein vs. Swiss-Prot (Human)
Match: KIF9 (Kinesin-like protein KIF9 OS=Homo sapiens GN=KIF9 PE=1 SV=4)

HSP 1 Score: 103.99 bits (258), Expect = 2.412e-27
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0 
Query:    6 QRHVQVFVRIKPTDKYAVKNIELSSDNKSLTIHAQEDNTTKCMNHQIADWQYSVDGILHNASQEEVYKKCTANQVTLALNGYNSTIFSYGQTGAGKTFTMTG 107
            ++ V  FVR+KPTD +A + I    D +S+ IH ++D     +N+Q  DW + +DG+LH+ASQ+ VY+    + V+ AL+GYN TI  YGQTGAGKT+TM G
Sbjct:    4 RKKVHAFVRVKPTDDFAHEMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLHDASQDLVYETVAKDVVSQALDGYNGTIMCYGQTGAGKTYTMMG 105
The following BLAST results are available for this feature:
BLAST of TCONS_00020982-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF92.412e-2747.06Kinesin-like protein KIF9 OS=Homo sapiens GN=KIF9 ... [more]
back to top