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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00020949-protein ID=TCONS_00020949-protein|Name=TCONS_00020949-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00020949-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.376e-30 Identity = 67/162 (41.36%), Postives = 84/162 (51.85%), Query Frame = 0
Query: 233 WSPWSECSTTC-NGTRNRQREC------FG--FCDGPTDELENCGTPYCPIHGGLSEWSQWSNCDATCGGGTTTRTRNCDAPKPQHNGNDCVGSLVDSDDCGVGNCPVDAQWAEWSVWSSCDKPCNTGHYVRRRTC-NPANYGGNLECPGSNDEKQPCNVEV 384
W PW CS +C GT+ R R C FG +CDG +++ C CPIHG + W+ WS C +CGGG RTR C P PQ+ G C GS V SD C CP W+ WS W +C + CN G R RTC NP G C G + + Q CN ++
Sbjct: 4649 WQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDM 4810 HSP 2 Score: 113.235 bits (282), Expect = 6.266e-27 Identity = 64/164 (39.02%), Postives = 79/164 (48.17%), Query Frame = 0
Query: 229 GFGPWSPWSECSTTC-NGTRNRQRECF--------GFCDGPTDELENCGTPYCPIHGGLSEWSQWSNCDATCGGGTTTRTRNCDAPKPQHNGNDCVGSLVDSDDCGVGNCPVDAQWAEWSVWSSCDKPCNTGHYVRRRTCN--PANYGGNLECPGSNDEKQPCN 381
GF WS W CS TC G + R R C C G E+ NC CP+ G SEWS W C +CG G TRTR C+ P QH G C G+ V+ C + CPV W+ W W +C + C G R R CN P +GG+ C G+ + Q CN
Sbjct: 4531 GFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSY-CDGAETQMQVCN 4693 HSP 3 Score: 103.605 bits (257), Expect = 1.128e-23 Identity = 60/161 (37.27%), Postives = 72/161 (44.72%), Query Frame = 0
Query: 233 WSPWSECSTTCNG-TRNRQREC------FG--FCDGPTDELENCGTPYCPIHGGLSEWSQWSNCDATCGGGTTTRTRNCDAPKPQHNGNDCVGSLVDSDDCGVGNCPVDAQWAEWSVWSSCDKPCNTGHYVRRRTC-NPANYGGNLECPGSNDEKQPCNVE 383
W+ WS CS +C G R R R C +G C+G + + C + CP HG S WS W C TC GG R R CD P P + G C G C CPVD W W WS C C G R+R C +P G CPG + CNV+
Sbjct: 4706 WASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQ 4866 HSP 4 Score: 98.9821 bits (245), Expect = 3.568e-22 Identity = 57/159 (35.85%), Postives = 75/159 (47.17%), Query Frame = 0
Query: 233 WSPWSECSTTC-NGTRNRQRECFGF--------CDGPTDELENCGTPYCPIHGGLSEWSQWSNCDATCGGGTTTRTRNCDAPKPQHNGNDCVGSLVDSDDCGVGNCPVDAQWAEWSVWSSCDKPCNTGHYVRRRTC-NPANYGGNLECPGSNDEKQPCN 381
WS W EC+ +C G + R R C C+G E+ C CP+HG S W W C +CG GT TR R C+ P P G+ C G+ C NCP+ +WA W+ WS+C C G R R C +P G +C GS+ + CN
Sbjct: 4592 WSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCN 4750 HSP 5 Score: 95.1301 bits (235), Expect = 6.560e-21 Identity = 46/111 (41.44%), Postives = 61/111 (54.95%), Query Frame = 0
Query: 274 IHGGLSEWSQWSNCDATCGGGTTTRTRNCDAPKPQHNGNDCVGSLVDSDDCGVGNCPVDAQWAEWSVWSSCDKPCNTGHYVRRRTC-NPANYGGNLECPGSNDEKQPCNVE 383
+HGG S+WS W C TCG G R+R C+ P P + G C GS ++ +C CPVD W+EWS+W C + C G+ R RTC NP+ G C G+ E CN+
Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIR 4638 HSP 6 Score: 83.9593 bits (206), Expect = 2.898e-17 Identity = 48/118 (40.68%), Postives = 55/118 (46.61%), Query Frame = 0
Query: 232 PWSPWSECSTTCNGTRNRQ-RECFG--------FCDGPTDELENCGTPYCPIHGGLSEWSQWSNCDATCGGGTTTRTRNCDAPKPQHNGNDCVGSLVDSDDCGVGNCPVDAQWAEWSV 340
PWS W CS TCNG + R+ R C C GP +++ C T CP+ G W WS C A+CGGG TR R CD P P G C G C V CP Q A SV
Sbjct: 4762 PWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACPGGPQRARGSV 4879 The following BLAST results are available for this feature:
BLAST of TCONS_00020949-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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