Putative cnidarian restricted protein (polypeptide) - C. hemisphaerica

Overview
NamePutative cnidarian restricted protein
Unique NameTCONS_00020705-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2502

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020705-protein ID=TCONS_00020705-protein|Name=Putative cnidarian restricted protein|organism=Clytia hemisphaerica|type=polypeptide|length=2502bp
MSEENVAVYRRRKTSRTEGADTRQRVIGGIGRRKVSGANAIQGRIQQFAG
GENAITENPKEENESSKFTIGVNSPRLRRSSSNSSTGTNSGSISEIRASR
RQTNLSRSNSSASSSTESTSSITVTAKPSTTNTNSDVKSTSNSSVETVPN
ASETDTMTSSTTVRYGAINTPGRSRRVSVATSTGKEHSQNPTLRKRTDSE
SSLNQGSLLRSKQMKWENLANEKKEEKARTPSLYRRKFSTNEEVKVNLPY
TSDEKKEEPEKPALTRNLGTRGSMRIRTQTKGIEVSSSAESKVELAIKNA
TKSNEITSKTDRLTRTNSVTSRLQSSDQTNSSTTSPKEKKVPPPVAPKRS
ASFKNTSSSIAQLQSQLEKDFVDKPISSKSSTSVVEEKPVEKKRYGLGSP
RSSQQIKKDSPPQSTSNLTSPTTSKENISNVNKIKHRFRDVNNNDSTTTT
NNGTDSPKRHSNGSESSDDKSGTDKTDSSTPSKTGSTTPAPVRKKSNIPL
KTPGSTENLQKKYGNSWRNTNVNKSFDHFSTRDVVTSNNGITTKNDRKNF
FQNTDDKTSAEKEKENVTTAINGYNNTKSPTISNLIETDSNTKHHNSSNH
DKKTQSKISPVSSSTQIKVHSNSLKGTINGERNEDKTSDFQNVMDDPSND
TKLKAEVNDLIDRLDNNSDPVNVVEQENCRDGKKTNDTGEAESIANSFHA
VKELVDQNQVSEQKKRQGDIFLKENNNSLLRGRVTYVNEKSNFVFDTGLN
SDNKYTNGINSDAIVVEKRLLENNYAKQKTINTDIRLPTRDRSNTWTTTS
DSEDNFLSSEVFSPEEKDQSASSSSSSVKYEEKDAFGRRRRLTKKRSKRS
KTRPKIYMRNIQNRSLDTSDADVLESNYTSDDFSTSRSRELSSAAESTIC
ESDLNDNYESLDLSLTNKSINLPTVKNNIETQYSENNHNRIRVSEPTIRN
SKIAELKEANRKVLIYDGSMKSSSMTTITKPLQQQNLMSLSSSNMGGSRS
EDEGSKLFNLHKNKDERIGSVTSISKVRVLNFNAPSFKSTRSVSADTNHM
HSTSYSDISHSNNNSIKSSPFSLSSSFNKPSLDGHMSDRRSDEEVEKKER
LELLKQGPLFNRDKPFTFNNKPQIPDEESKKNAEVLNSLPNARNYMSERY
VQDCENNMKSKSAGNLSTMMNTISIEKEIDVDGDFSSNTFPKSQSFSDSL
DIQQSHNTDYIAPPENFQDELTASPARSPRKIRNRPSLNAFSSKTFTNID
EENKVSLDEDDAFVPESPCLKDTEINEIKIPKVPPPPQDGDSQEVKVRKR
PGLPNISTTQMVKDTNKIVSPTQEENRVITPPNTNEEKLGHEVESEDEDL
NILKQVVENKTENKRSRPRQPIVVPPFLDNIPEIPFSLKSREDSRKKKQQ
KYGFQEPTIEEEPAKCDSPKPQEQDVDSQSQGSRSTPRDLSMEDLSSELE
TENKDEETPKEWTQTSKPTTPTSFSFNEDTTNDLDASIRSPTTPSSANTP
SSATLYDETQTVTVVQNDNISIPVINTPEVDVKPVSPAPKTKTPKQEMRR
HVLQNLLDTEKSYVNNMESMLTMFYHPLKRPDNNIIEPTLVDEIFYQIPE
LLDNHKHFYEDITARIDDWSDSQIIGDIFINQFTKHNLMDAYSNFINNFV
QAKDAIRQASSRPQFTKYIETCSQKHHEKLTLNDLLIMPVQRIPRYMLIL
KDLLKYTTPEHPDYDSLERAMQEIKTLADRMNKGEVEADQAEKDIEKLRD
IEHTIEGISDLVTNTRKFIRQDLVAENKGSITKKDRCLFLFSNLLVCTTV
RRKNNVLRRNSLFNGQSTPEFNRYKFVWKLALENIEICKVSNPQQNGGSR
ELEKLEDDIRILNDILNMSDNISVPHQNMENSIREQLNEVRALIQEKQTQ
SPQTTLSPSLSRIELQAQTEDDVENYTFQFLSAECKSSWEAYFNDAKQKL
AYSRDAFPPEFQYPTPITKTRSGMQFTCAAPSYINSFTGASTEENRMPGD
VWVCNSDGYVGQVCLLSMIPGVQSKASLSVCSARIVCIAVIPGGRLKSDK
NSNNVSNLPKISDTPRKKSKRRKQAFSTDVSDDDDNSGASAIMAFDSSGD
EDDPPMSNHYMGVTGVGMNFGGGRISPGDSSLGATESMDGDRGSSDDDYT
SDEDEQTNMQNEQDEDDEGLDAKACMWLGTEDRHIYIYNAQDTIPQRKSR
VRLTMKSPVTSILYHENKVFVALSGGELCIYKRDLNGVWDLTAPETVQVS
MTGSNITCMTAVAGRIWCGSQNTILLVNVTSFSLESPIKVHPEHTRTVHK
IVSSGLGVWVSIQSSAVVRLYHATTYENLLDLDVSKAVEKMLNGADAIIK
QHKLACLRVTSLLICKDLLWIGTSAGVVLTNPLPSITANMSVPVLRNNGP
TGSPHGHTGHVRFLTSVEVPKGSFKTTDHDQRDLSRVSPSPSRDRLKRVD
SNKYKELDSNDTNGTMTLVVSGGDGYEDFKYSQQNETVGRDDSTNHLLLW
RV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011612XLOC_011612Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020705TCONS_00020705Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000219DH-domain
IPR011993PH_dom-like
IPR001331GDS_CDC24_CS
IPR017986WD40_repeat_dom
Vocabulary: Biological Process
TermDefinition
GO:0035023regulation of Rho protein signal transduction
GO:0035556intracellular signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005089Rho guanyl-nucleotide exchange factor activity
GO:0005085guanyl-nucleotide exchange factor activity
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0035023 regulation of Rho protein signal transduction
molecular_function GO:0005085 guanyl-nucleotide exchange factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005089 Rho guanyl-nucleotide exchange factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1717..1751
NoneNo IPR availableCOILSCoilCoilcoord: 1343..1363
NoneNo IPR availableCOILSCoilCoilcoord: 1876..1900
NoneNo IPR availableGENE3D1.20.900.10coord: 1535..1755
e-value: 6.5E-61
score: 205.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1279..1504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1039..1097
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2048..2169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 790..864
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 539..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2423..2447
NoneNo IPR availableCDDcd00160RhoGEFcoord: 1549..1732
e-value: 1.20011E-47
score: 170.171
IPR000219Dbl homology (DH) domainSMARTSM00325RhoGEF_3coord: 1552..1733
e-value: 2.6E-51
score: 186.5
IPR000219Dbl homology (DH) domainPFAMPF00621RhoGEFcoord: 1552..1732
e-value: 1.3E-44
score: 152.5
IPR000219Dbl homology (DH) domainPROSITEPS50010DH_2coord: 1548..1734
score: 34.98
IPR000219Dbl homology (DH) domainSUPERFAMILY48065DBL homology domain (DH-domain)coord: 1536..1748
IPR011993PH domain-likeGENE3D2.30.29.30coord: 1756..1964
e-value: 1.2E-16
score: 60.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 1745..1846
coord: 1914..1948
IPR001331Guanine-nucleotide dissociation stimulator, CDC24, conserved sitePROSITEPS00741DH_1coord: 1682..1707
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 2176..2411

Blast
BLAST of Putative cnidarian restricted protein vs. Swiss-Prot (Human)
Match: ARHGH (Rho guanine nucleotide exchange factor 17 OS=Homo sapiens GN=ARHGEF17 PE=1 SV=1)

HSP 1 Score: 434.876 bits (1117), Expect = 3.360e-123
Identity = 224/549 (40.80%), Postives = 346/549 (63.02%), Query Frame = 0
Query: 1515 VQNDNISIPVINTPEVDVKPVS-------PAPKTKT---PKQEMRRHVLQNLLDTEKSYVNNMESMLTMFYHPLKRPDNNII-EPTLVDEIFYQIPELLDNHKHFYEDITARIDDWSDSQIIGDIFINQFTKHNLMDAYSNFINNFVQAKDAIRQA-SSRPQFTKYIETCSQKHHEKLTLNDLLIMPVQRIPRYMLILKDLLKYTTPEHPDYDSLERAMQEIKTLADRMNKGEVEADQAEKDIEKLRDIEHTIEGISDLVTNTRKFIRQDLVAENKGSITKKDRCLFLFSNLLVCTTVRRKNNVLRRN--SLFNGQSTPE-FNRYKFVWKLALENIEICKVSNPQQNGGSRE-----LEKLEDDIRILNDILNMSDNISVPHQNMENSIREQLNEVRALIQEKQTQSPQTTLSPSLSRIELQAQTEDDVENYTFQFLSAECKSSWEAYFNDAKQKLAYSRDAFPPEFQYPTPITKTRSGMQFTCAAPSYINSFTGASTEENRMPGDVWVCNSDGYVGQVCLLSMIPGVQSKASLSVCSARIVCIAVIPG 2043
            V  D   +P+   P  + KP         P P +K    P+ +MR+HV   LLDTE+SYV ++ +++  +  PLK+P+N+++ +P+LVDEIF QIPELL++H+ F E +   +  W   Q +G + +  F+K  L++ YS +I+NF+ AKDA+R A  +RP F K++E   +++ EK  L+DL+I PVQRIPRY L++KDLLK+T  +HPD+  L  A + IK +A+R+NKG   A++AE+    L++IE  IEG+ DL    R+F+RQ++V E K    KKDR LFLF++L+VCTT++RK+  LRR+  SL+   S  +  ++YK +WKL LE+ +I K ++   N   RE     + +L++D+  L  +  +S+++  PHQ++++++R+    +   + EKQ      +  P  +++EL A   +  ++Y F+F   + +  +E  F++AK+KLA S+    PEF    PI KTRSGMQF+CAAP+ +NS    S E       VWVCNSDGYVGQVCLLS+      +A ++VCSARI+CI  +PG
Sbjct: 1023 VPVDMPCLPLAAPPSAEAKPPEAARPADEPTPASKCCSKPQVDMRKHVAMTLLDTEQSYVESLRTLMQGYMQPLKQPENSVLCDPSLVDEIFDQIPELLEHHEQFLEQVRHCMQTWHAQQKVGALLVQSFSKDVLVNIYSAYIDNFLNAKDAVRVAKEARPAFLKFLEQSMRENKEKQALSDLMIKPVQRIPRYELLVKDLLKHTPEDHPDHPLLLEAQRNIKQVAERINKGVRSAEEAERHARVLQEIEAHIEGMEDLQAPLRRFLRQEMVIEVKAIGGKKDRSLFLFTDLIVCTTLKRKSGSLRRSSMSLYTAASVIDTASKYKMLWKLPLEDADIIKGASQATN---RENIQKAISRLDEDLTTLGQMSKLSESLGFPHQSLDDALRDLSAAMHRDLSEKQALCYALSFPP--TKLELCATRPEGTDSYIFEFPHPDARLGFEQAFDEAKRKLASSKSCLDPEFLKAIPIMKTRSGMQFSCAAPT-LNSCPEPSPE-------VWVCNSDGYVGQVCLLSLRAEPDVEACIAVCSARILCIGAVPG 1558          

HSP 2 Score: 292.738 bits (748), Expect = 3.064e-79
Identity = 161/403 (39.95%), Postives = 231/403 (57.32%), Query Frame = 0
Query: 2123 GRISPGDSSLGATESMDGD--RGSSDDDYTSDEDEQTNMQNEQDEDDEGLDAKACMWLGTEDRHIYIYNAQDTIPQRKSRVRLTMKSPVTSILYHENKVFVALSGGELCIYKRDLNGVWDLTAPETVQVSMTGSNITCMTAVAGRIWCGSQNTILLVNVTSFSLESPIKVHPEHTRTVHKIVSSGLGVWVSIQSSAVVRLYHATTYENLLDLDVSKAVEKMLNGADAIIKQHKLACLRVTSLLICKDLLWIGTSAGVVLTNPLPSITANMSVPVLRNNGPTGSPHGHTGHVRFLTSVEVPKG-----------------SFKTTDHDQRDLSRVSPSPSRDRLKRVDSNKYKELDSNDTNGTMTLVVSGGDGYEDFKY----SQQNETVGRDDSTNHLLLWRV 2502
            G   PG      T  MDG   R SS   +T     + ++++    D E    ++ +WLGTED  +++Y + D+I  R++ ++L   + VT ILY  N+VFV+L+ GEL +Y+R+    WD    ++V +   GS IT M +V GR+WCG QN +L+++  +  LE    V  + +R V  +V S LGVWV+++ SA V LYH  T+E L ++DV+  V +ML G+DAII+QHK ACLR+T+LL+C++LLW+GTSAGVVLT  +P+    +S P    + PTG   GHTGHVRFL +V++P G                    + +H      R  P+P+R ++                     LV+SGGDGYEDF+        +ETVGRDDSTNHLLLWRV
Sbjct: 1695 GSFGPGGPC--GTSPMDGRALRRSSHGSFT-----RGSLEDLLSVDPEAY--QSSVWLGTEDGCVHVYQSSDSIRDRRNSMKLQHAASVTCILYLNNQVFVSLANGELVVYQREAGHFWDPQNFKSVTLGTQGSPITKMVSVGGRLWCGCQNRVLVLSPDTLQLEHMFYVGQDSSRCVACMVDSSLGVWVTLKGSAHVCLYHPDTFEQLAEVDVTPPVHRMLAGSDAIIRQHKAACLRITALLVCEELLWVGTSAGVVLT--MPTSPGTVSCPRAPLS-PTGLGQGHTGHVRFLAAVQLPDGFNLLCPTPPPPPDTGPEKLPSLEHRDSPWHR-GPAPARPKM---------------------LVISGGDGYEDFRLSSGGGSSSETVGRDDSTNHLLLWRV 2063          
The following BLAST results are available for this feature:
BLAST of Putative cnidarian restricted protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHGH3.360e-12340.80Rho guanine nucleotide exchange factor 17 OS=Homo ... [more]
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