TCONS_00020680-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020680-protein
Unique NameTCONS_00020680-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length616

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020680-protein ID=TCONS_00020680-protein|Name=TCONS_00020680-protein|organism=Clytia hemisphaerica|type=polypeptide|length=616bp
MQLPEDDEDNEEQALWIKHSQGQYDDASNGASIDAGNENKRTQPWFLLPA
SVTVAALGGVLFGYDVGIISGAILLLREEFNLTCIQQELVVTVLLIGGLI
SSFVGGFFLDQFGRKTTIILNAFLFLIGALVLSFANGFGIFIIGRLILGF
AVALSAVGDCVYISEIAPPKKRGLLVSLNELGITLGLLLAYFVNYILIDS
KNGWRYMFGISAIPALGQAIGMAFLPKSPRWLLLKGQEEKAMQIAATLWP
NLNVRLEIDRMKTSLSREQSYSFLDLFSSKDNMRMRMMIGCSVILFQQLT
GQPTVLYYAPVLFKRLGFNMNTSATLATIGLGIVKVVFTMGTLLSVDKLG
RRKFLLVGATIMTISLITLSAVTEPFQNGNEQPACHDYIGTQKVHSHLLN
VDNNNNRNCTIEHFNNTIIDGIKNKTLTHKKLGNSSSIIKKTLCRNSTKN
KTNLRTDHDNDDNDAMGSIPGSVKYTCLFALMLFVIGYAVGYGPMSWLIL
TEIFPTAIKGRAASVATSVNWGTNIVISLTFLDVLGSLGPFLTFLCYSVI
GVVSIIFLYHIVPETKGKSLEEISEHLNERRVKCSTVRCCAEGQMIYVQD
DEGDILLNDNEAEDIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011600XLOC_011600Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020680TCONS_00020680Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003663Sugar/inositol_transpt
IPR005828MFS_sugar_transport-like
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022891substrate-specific transmembrane transporter activity
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0022891 substrate-specific transmembrane transporter activity
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003663Sugar/inositol transporterPRINTSPR00171SUGRTRNSPORTcoord: 142..161
score: 28.71
coord: 478..499
score: 26.89
coord: 297..307
score: 46.44
coord: 59..69
score: 54.62
coord: 501..513
score: 30.19
IPR003663Sugar/inositol transporterTIGRFAMTIGR00879TIGR00879coord: 40..379
e-value: 2.1E-81
score: 272.0
NoneNo IPR availableGENE3D1.20.1250.20coord: 50..243
e-value: 6.9E-36
score: 123.0
NoneNo IPR availableGENE3D1.20.1250.20coord: 259..588
e-value: 8.0E-39
score: 132.6
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 52..379
e-value: 7.0E-84
score: 282.2
coord: 472..575
e-value: 1.5E-25
score: 89.9
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 105..122
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 342..359
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 51..566
score: 55.551
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 52..377
e-value: 8.78686E-39
score: 144.764
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 51..376
coord: 476..575

Blast
[Close]
BLAST of TCONS_00020680-protein vs. Swiss-Prot (Human)
Match: GTR12 (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 3.779e-131
Identity = 222/575 (38.61%), Postives = 352/575 (61.22%), Query Frame = 0 
Query:   17 IKHSQGQYDDASNGASIDAGNENKRTQPW------FLLPASVTVAALGGVLFGYDVGIISGAILLLREEFNLTCIQQELVVTVLLIGGLISSFVGGFFLDQFGRKTTIILNAFLFLIGALVLSFANGFGIFIIGRLILGFAVALSAVGDCVYISEIAPPKKRGLLVSLNELGITLGLLLAYFVNYILIDSKNGWRYMFGISAIPALGQAIGMAFLPKSPRWLLLKGQEEKAMQIAATLWPNLNVRLEIDRMKTSLSREQSYSFLDLFSSKDNMRMRMMIGCSVILFQQLTGQPTVLYYAPVLFKRLGFNMNTSATLATIGLGIVKVVFTMGTLLSVDKLGRRKFLLVGATIMTISLITLSAVT-EPFQNGNEQPACHDYIGTQKVHSHLLNVDN-NNNRNCTIEHFNNTIIDGIKNKTLTHKKLGNSSSIIKKTLCRNSTKNKTNLRTDHDNDDNDAM---GSIPGSVKYTCLFALMLFVIGYAVGYGPMSWLILTEIFPTAIKGRAASVATSVNWGTNIVISLTFLDVLGSLG-PFLTFLCYSVIGVVSIIFLYHIVPETKGKSLEEISEHLNE 579
            +++++G       G +++      R  PW      F   +SVT AA+ G+L GY++GIISGA+L ++    L+C +QE+VV+ L+IG L++S  GG  +D++GR+T IIL++ L  +G+LVL  +  + + I+GR+ +G +++LS++  CVYI+EIAP  +RGLLVSLNEL I +G+L AY  NY   +  +GW+YMFG+     + QAI M FLP SPR+L++KGQE  A ++   L    +   E+  +K+SL  E  YSF DLF SKDNMR R+MIG +++ F Q+TGQP +L+YA  + K +GF  N +A+LA+ G+G+VKV+ T+   L VD +G + FL +G+++M  SL+T+  V      N       H+ I      S +    N + N N   +HF      GI +   +   L    + + K   R  T + + L     + +   +   G +P  +K+  L +L+++V  +++G GPM WL+L+EIFP  I+GRA ++ +S+NWG N++ISLTFL V   +G P++ F+ Y+++ + S++F+   +PETKG SLE+IS  L +
Sbjct:    4 VENTEGPSLLNQKGTAVETEGSGSRHPPWARGCGMFTFLSSVT-AAVSGLLVGYELGIISGALLQIKTLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVMKGQEGAASKVLGRLRALSDTTEELTVIKSSLKDEYQYSFWDLFRSKDNMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQSNEAASLASTGVGVVKVISTIPATLLVDHVGSKTFLCIGSSVMAASLVTMGIVNLNIHMNFTHICRSHNSINQSLDESVIYGPGNLSTNNNTLRDHF-----KGISSH--SRSSLMPLRNDVDK---RGETTSASLLNAGLSHTEYQIVTDPGDVPAFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFI-YTIMSLASLLFVVMFIPETKGCSLEQISMELAK 566
The following BLAST results are available for this feature:
BLAST of TCONS_00020680-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GTR123.779e-13138.61Solute carrier family 2, facilitated glucose trans... [more]
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