TCONS_00020652-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020652-protein
Unique Name	TCONS_00020652-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	517

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020652-protein ID=TCONS_00020652-protein|Name=TCONS_00020652-protein|organism=Clytia hemisphaerica|type=polypeptide|length=517bp
MVDKEKKFLLAVDFGSTSLVACIFDLKTNLLVKASTKVPYIHLPEGGLEI
NPEELWDAFVNTMKNALKKAEISALNIKAFGFCTQRGTFMLWNKNNGEPY
TNFISWQDNRCRNVVDRMNHCWTKKAINVFGTIMYTLLRQTRFLLMKAIN
FEANQASMKLIHFFDDNPDIKQAAYEGDVLFGTIDTYIIWRLSKRKLHLT
DISCASGTAMFDPYLRKWSDICPLLFDVSLSVFPELTDTSGHILDVPEEI
FGASFPLTSVVADTQATVFGLNGFNAGDACAVLGTGSFLMVNTGNYCHAS
VKGVYPQIGWQIKDEVALICEGNITGIAPSIEWAREIGLYENVNELSDFV
KTVEGTDGMYFIPAFNGLSAPYRDPFACTGFIGIKRNGTKVQMARAVCEG
IAFRFLEMYNVMREETHIPFEPVIRLCGGISKNDFIMELISSLADCTIER
AYNHDTSCLGAACLAGLAAGVWKDKEEMMQHTQKPTIIKPDPILKQRYLP
IYKEWKTAAKRCLKWYT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011584	XLOC_011584	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020652	TCONS_00020652	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000577	Carb_kinase_FGGY
IPR018485	Carb_kinase_FGGY_C
IPR018484	Carb_kinase_FGGY_N

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016773	phosphotransferase activity, alcohol group as acceptor

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0016773	phosphotransferase activity, alcohol group as acceptor

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000577	Carbohydrate kinase, FGGY	PIRSF	PIRSF000538	GlpK	coord: 6..517 e-value: 1.9E-104 score: 347.7
None	No IPR available	GENE3D	3.30.420.40		coord: 3..271 e-value: 4.9E-48 score: 163.5
None	No IPR available	GENE3D	3.30.420.40		coord: 272..516 e-value: 1.7E-52 score: 178.0
None	No IPR available	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 8..271
None	No IPR available	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 274..516
IPR018485	Carbohydrate kinase, FGGY, C-terminal	PFAM	PF02782	FGGY_C	coord: 280..469 e-value: 3.7E-30 score: 105.0
IPR018484	Carbohydrate kinase, FGGY, N-terminal	PFAM	PF00370	FGGY_N	coord: 9..270 e-value: 2.5E-33 score: 115.6

Blast

[Close]

BLAST of TCONS_00020652-protein vs. Swiss-Prot (Human)
Match: GLPK5 (Putative glycerol kinase 5 OS=Homo sapiens GN=GK5 PE=2 SV=2)

HSP 1 Score: 378.637 bits (971), Expect = 4.056e-126
Identity = 191/509 (37.52%), Postives = 287/509 (56.39%), Query Frame = 0

Query:    8 FLLAVDFGSTSLVACIFDLKTNLLVKASTKVPYIHLPEGGLEINPEELWDAFVNTMKNALKKAEISALNIKAFGFCTQRGTFMLWNKNNGEPYTNFISWQDNRCRNVVDRMNHCWTKKAINVFGTIMYTLLRQTRFLLMKAINFEANQASMKLIHFFDDNPDIKQAAYEGDVLFGTIDTYIIWRLSKRKLHLTDISCASGTAMFDPYLRKWSDICPLLFDVSLSVFPELTDTSGHILDVPEEIFGASFPLTSVVADTQATVFGLNGFNAGDACAVLGTGSFLMVNTGNYCHASVKGVYPQIGWQIKDEVALICEGNITGIAPSIEWAREIGLYENVNELSDFVKTVEGTDGMYFIPAFNGLSAPYRDPFACTGFIGIKRNGTKVQMARAVCEGIAFRFLEMYNVMREETHIPFEPVIRLCGGISKNDFIMELISSLADCTIERAYNHDTSCLGAACLAGLAAGVWKDKEEMMQHTQKPTIIKPDPILKQRYLPIYKEWKTAAKRCLKWY 516
            F+L +D GS+ +   ++D    +   +  KV  ++   G +EI+P+ LW  FV  +K A+K A I    I   G  TQR TF+ WNK  G  + NFISWQD R   +V   N+    K  +    +++   R  R        F   Q S++L+    +  ++++A  E +  FGTIDT+++++L+K  ++ TD S AS T +FDPY   WS +   L  + LS+ P + DTS +   V EEIFG   P+ ++VAD Q+ +FG   F  GD    +GTG+FL +NTGN    +  G YP IGW+I  EV  + E N      +I+WA+++ L+ +  E     K++E ++G+ F+P+F+GL AP  DP+AC  F+G+K + +K  + RA+ E IAFR  ++Y +M++E HIP    IR  GG+ KN F+M++ S L +  I+R  + D SCLGAA LAGLA G W DKEE+ +  Q   + KP     Q Y    + W  A KR + WY
Sbjct:   20 FVLGLDVGSSVIRCHVYDRAARVCGSSVQKVENLYPQIGWVEIDPDVLWIQFVAVIKEAVKAAGIQMNQIVGLGISTQRATFITWNKKTGNHFHNFISWQDLRAVELVKSWNNSLLMKIFHSSCRVLHFFTRSKRLFTASLFTFTTQQTSLRLVWILQNLTEVQKAVEEENCCFGTIDTWLLYKLTKGSVYATDFSNASTTGLFDPYKMCWSGMITSLISIPLSLLPPVRDTSHNFGSVDEEIFGVPIPIVALVADQQSAMFGECCFQTGDVKLTMGTGTFLDINTGNSLQQTTGGFYPLIGWKIGQEVVCLAESNAGDTGTAIKWAQQLDLFTDAAETEKMAKSLEDSEGVCFVPSFSGLQAPLNDPWACASFMGLKPSTSKYHLVRAILESIAFRNKQLYEMMKKEIHIPVRK-IRADGGVCKNGFVMQMTSDLINENIDRPADIDMSCLGAASLAGLAVGFWTDKEELKKLRQSEVVFKPQKKC-QEYEMSLENWAKAVKRSMNWY 526

The following BLAST results are available for this feature:

BLAST of TCONS_00020652-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020652-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GLPK5	4.056e-126	37.52	Putative glycerol kinase 5 OS=Homo sapiens GN=GK5 ...	[more]

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TCONS_00020652-protein (polypeptide) - C. hemisphaerica