TCONS_00020645-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020645-protein
Unique NameTCONS_00020645-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2084

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020645-protein ID=TCONS_00020645-protein|Name=TCONS_00020645-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2084bp
MHRKLLLSLLISFIHHIHGQLRVTTDFQDVTVDHDRSRSFRCSATGGTPP
YRFQWFQDSNEVDNVPSKVSLNALGDTMTIFRMDKTLAGEYRCVVTDNSN
NERRSNNFKIQYRGRKPGEVSNPKAEPVRGSESTKVLLSWSIPNDLGFNR
AQDIIYSIKLCVLPRLTSCSAQQTNELSTQMSVKPGTQYSIIITTSTVTG
LNGKAAPLVFTTPLCSTSQYKCPNERKCIRNTTLSSQICDGTEDCRDKSD
ESDLCSKPSPVELLEPEVGTRYSIIIKWKKPRASERITGYQILLSNGFVD
NFKDVDGTMVRREITNLKQNTKYTVEIRARNPSGFSIKSSKGVFKTDKGP
VGDAVDIENYSKKRVQFFKWKPPTETGGVALNELLYTIRWQKKGSKLKPF
AQNITGGRLEYEIPMDNYKDKDNFYYWFTVSNGARTGGNKTVDDTFVFKP
REPFEFLSVEVFRTFIVLAWPSHVPPDVVFGYSLKVGGKSYKLKSDVTDY
NVTGLEKDTEYKIQLTRRNGDRDDQYTSTTELTKNCAPQEFQCQNGECLP
NFGQVCNSNKDCSDGSDEEHLYKPANCKLPGIVDFNITAQYKGLKIHLLN
LNGSLSGVVIVDINGASGDVIKLPNGQSVRGVKRDSQFGALIIQHPDFSP
SIASTVYVYGVSQSGNGPVLSKQTRTLGPIALPPELIEQGPTFLKIEFQG
LPGINELSLESYTIEYRHTNDHNKLNETLKIKTSIRPLKYLFDDLEYNTS
YSFRYKVEDSDGESDKSPWIKFSTSERELPGEIENLEVRPRRSEIDVIWD
KADGQSIVGYTVQYKTSSTSSWEDGNEEKVTSNKYTIQELEPNENYDVRV
AARNDKGSGEFTEASTTTDANICPGYDWKKYGSSCYYRGPAGLDGKTFDE
ARDICEKLGGDLVSIGSASEGDAVLYEVRREPVVNVAYFNGLQRTSDTAY
KWTDGTSFGYSQIDQDEPFNKRQQCVLMVAKDGGQFAWVAARCDNEEGFM
CKRENVNDKPLELKLKSNEFDSLTFQLPTTTLNRQPKYFVEIIDSEGGRR
TLTVSSDDGEFTVNKLTEDDEYDITVQEDFFGLGPKTKQEIFRTARFISP
KAVKESNDKKVRYAESQKREIEWKYGDLGDSLLENVKVRVRFCYFAKCDF
VDFNGTKGVLEDLRADTKYNYTLQVYDTKYLKSGKIAEAKEFRTDEQDTC
RDDEWLCAGGSKCIKQEQRCDNKFDCPSDIPGRAVDEQKIAGCSPPEEVE
IGKVIGGLNFLKIHWKSPTKDQRVRGYTLLVNNKTRHSISGNTTSFRVSN
LKEGSLVTYSLSAFNPTGDGEKVTSNKKLANESAPTTAVQNLKADDVKSN
EKNQRRISWEIPSKLNNNDPETIQYDIKLCYTNQKEKSQTCDEKSVTNKL
HYIIQSLKPSKNYSVVVTATNEYDQSSAPSNEIRFKTTLCNSNEFECKLD
GTCVSKNATCDGKKDCKDAADEKKSAGCSLSPNVVIEKENLGISSIAIKY
HKLERVANQIVFTLTTKEGSFLQEEVVKGGDVLKDGVVTFTKGVKANSEY
KVKAVVYNFIGKNKGTVLEIETPEKNAPAGKPQKIEFKTTENEESSSVQV
SWKAPFVTGGKAKNQLKYKIRVCIDGTEDCNDVISEEGSTERLVDGLKPD
TQYRFKISVFSGEDERGDEQKASYKTLEKDTCKDETYYRCPIKCLNPNRV
CDGIIDCIDRSDESKAAKCSAPEKIEKVNVEASWNSLTFKWEEPANNPIE
YHLTMKCTVNDVESPLVETTIPKKEQSYTFEGLTENEDKATCEFGIIPSN
LIGEAKQFKGVYKTKTLGTPSKPKESKVTKVDGFETKQVNLEWEAPSNLG
NARAKEIKYKLQWCRTEEDCKDKTVDGQSATLKDLKPGTEYDVEVTAINP
LGKSGEPLKFVFSTADKDTLPSPPQNVKVTKHPDHPNQKAIVQWETPKDK
NGLEKLQIKYRIEYCIKPVKDCRIIEIDTGTQNYTIVDMEGGQSYGIRVA
ALGRSGAFGDYSAKYFHTTEGSASSGLASWEIALIVVAILLIIVIILALV
IRAVYKSRSAKSYESTGGNEKAKMNGGYQADEKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011580XLOC_011580Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020645TCONS_00020645Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002172LDrepeatLR_classA_rpt
IPR003599Ig_sub
IPR001304C-type_lectin-like
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR016186C-type_lectin-like/link
IPR023415LDLR_class-A_CS
IPR007110Ig-like_dom
IPR016187CTDL_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPRINTSPR00261LDLRECEPTORcoord: 1692..1713
score: 46.56
coord: 1211..1232
score: 27.83
coord: 1451..1472
score: 43.35
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLa_2coord: 535..579
e-value: 2.8E-9
score: 46.8
coord: 214..257
e-value: 9.4E-5
score: 31.8
coord: 1199..1245
e-value: 0.012
score: 21.4
coord: 1439..1480
e-value: 1.3E-8
score: 44.6
coord: 1681..1721
e-value: 4.7E-5
score: 32.8
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPFAMPF00057Ldl_recept_acoord: 534..570
e-value: 1.0E-8
score: 35.2
coord: 1440..1473
e-value: 1.3E-6
score: 28.4
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 214..256
score: 11.65
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 535..578
score: 12.625
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 1681..1720
score: 10.588
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 1439..1479
score: 12.262
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 210..253
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 1433..1473
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 533..571
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 27..113
e-value: 0.0031
score: 26.8
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 873..1002
e-value: 1.4E-23
score: 94.4
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 895..1003
e-value: 2.1E-11
score: 44.4
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 881..1002
score: 15.783
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 1921..2006
e-value: 1.9E-4
score: 30.8
coord: 780..859
e-value: 4.7E-10
score: 49.4
coord: 1579..1667
e-value: 8.1E-6
score: 35.3
coord: 450..524
e-value: 1.5
score: 17.8
coord: 258..336
e-value: 5.5E-8
score: 42.5
coord: 1820..1904
e-value: 7.0E-10
score: 48.8
coord: 117..202
e-value: 6.5
score: 13.1
coord: 1243..1320
e-value: 0.02
score: 24.1
coord: 1336..1426
e-value: 0.0024
score: 27.1
coord: 1719..1805
e-value: 10.0
score: 11.4
coord: 677..764
e-value: 3.5
score: 15.5
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 1582..1663
e-value: 1.2E-7
score: 31.9
coord: 1338..1423
e-value: 2.0E-5
score: 24.7
coord: 783..861
e-value: 1.9E-12
score: 47.2
coord: 266..334
e-value: 7.5E-6
score: 26.1
coord: 1822..1904
e-value: 7.5E-8
score: 32.5
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1007..1097
score: 6.044
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 257..349
score: 13.586
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1338..1440
score: 15.835
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1104..1197
score: 6.738
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1721..1817
score: 7.527
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1245..1336
score: 11.148
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 680..777
score: 11.132
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 779..875
score: 16.055
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 119..215
score: 9.389
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1581..1680
score: 12.395
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 449..539
score: 9.066
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1819..1917
score: 16.726
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1923..2022
score: 14.194
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1580..1663
e-value: 7.68877E-8
score: 51.3431
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1244..1325
e-value: 1.57177E-5
score: 44.4095
IPR003961Fibronectin type IIICDDcd00063FN3coord: 780..868
e-value: 6.75359E-14
score: 69.4475
IPR003961Fibronectin type IIICDDcd00063FN3coord: 684..774
e-value: 3.41796E-4
score: 40.1723
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1820..1914
e-value: 5.17868E-10
score: 57.8915
IPR003961Fibronectin type IIICDDcd00063FN3coord: 258..346
e-value: 2.70222E-11
score: 61.7435
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1338..1437
e-value: 8.0392E-6
score: 45.1799
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1921..2019
e-value: 2.38825E-7
score: 49.8023
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 257..413
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 128..217
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 683..868
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 450..540
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 1540..1661
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 1819..2020
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 1259..1437
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1915..2023
e-value: 1.3E-11
score: 44.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 259..348
e-value: 1.2E-11
score: 44.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1103..1199
e-value: 0.017
score: 14.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 14..112
e-value: 5.6E-12
score: 45.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1822..1914
e-value: 9.8E-14
score: 50.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1245..1337
e-value: 9.4E-9
score: 35.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 662..773
e-value: 4.4E-8
score: 32.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1004..1078
e-value: 0.026
score: 14.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 113..212
e-value: 2.5E-5
score: 23.9
coord: 1338..1436
e-value: 1.2E-11
score: 44.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 774..857
e-value: 9.3E-19
score: 67.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1749..1821
e-value: 0.14
score: 12.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1516..1679
e-value: 2.6E-12
score: 46.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 349..443
e-value: 0.028
score: 14.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 450..531
e-value: 2.3E-4
score: 20.8
NoneNo IPR availableGENE3D4.10.400.10coord: 213..258
e-value: 8.0E-9
score: 34.7
coord: 1437..1482
e-value: 4.2E-9
score: 35.6
NoneNo IPR availableGENE3D4.10.400.10coord: 532..558
e-value: 1.9E-10
score: 40.3
NoneNo IPR availableGENE3D4.10.1220.10coord: 1707..1748
e-value: 4.1E-6
score: 26.2
coord: 559..592
e-value: 2.9E-6
score: 26.6
NoneNo IPR availableGENE3D4.10.400.10coord: 1680..1706
e-value: 8.1E-6
score: 25.6
NoneNo IPR availableGENE3D4.10.400.10coord: 1200..1244
e-value: 1.5E-4
score: 21.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2063..2084
NoneNo IPR availableCDDcd00112LDLacoord: 1684..1713
e-value: 0.00242906
score: 37.1862
NoneNo IPR availableCDDcd00112LDLacoord: 215..253
e-value: 4.53979E-6
score: 45.2754
NoneNo IPR availableCDDcd00037CLECTcoord: 884..1003
e-value: 7.18311E-18
score: 81.5121
NoneNo IPR availableCDDcd00112LDLacoord: 1200..1229
e-value: 3.09304E-4
score: 39.8826
NoneNo IPR availableCDDcd00112LDLacoord: 1440..1473
e-value: 3.2406E-7
score: 48.357
NoneNo IPR availableCDDcd00112LDLacoord: 536..570
e-value: 6.69898E-10
score: 56.4462
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 23..104
e-value: 2.0E-6
score: 27.7
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 858..1003
e-value: 6.8E-25
score: 87.2
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 1453..1478
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 19..109
score: 10.009
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 21..99
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 865..1004

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020645-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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