TCONS_00020634-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020634-protein
Unique Name	TCONS_00020634-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	611

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020634-protein ID=TCONS_00020634-protein|Name=TCONS_00020634-protein|organism=Clytia hemisphaerica|type=polypeptide|length=611bp
MATSCGCCERWSIYRRTIRRDLRLVRIVAGLEKGIKRAIRRNHITSDIFD
ATALKHPNKIAVCSSDDLVQYTFTELKNLINQIANIFYDLGYRKNDVVIL
FMENRPEYVAFWLGLSKLGVVTSLVNYNLRRESLEHCIKVAGAKGIIFSA
ETEGALRDIQSELRGYEFYCYGSANRIKEATDLPELIESTSTSNPPRPDN
LTFYDKLIYMYTSGTTGLPKPAVIRHTRFFFMVNGMASAFKVTEDDINYV
ALPLYHSNGGVGGIGMMIYKGSTVIVAKKFSASKFFQDCAYHGATMFNYI
GETCRYLLAQPPSRFDRAHRLRLAIGNGLRPQIWAEFKDRFSIDLIGECY
ASTEGNANMINIDNRIGAVGFNSVIAPGFYPIRLIRVDRSNGEIERDENG
MAIACEPGEAGELVGRVRNDPVHQFDGYVDKEATDKKIVHDIFVKGDSAF
RSGDILLQDKEGYFYFQDRGGDTFRWKGENVGTAEVEGVITRILRMTDVV
VYGVEIPGIEGRAGMACIADPDYIVDLVYLRNELLNKVPNYARPQFIRLS
NGDAIEQTSTFKYKKVKLREEGFNPLKVVDDRLYFNNQRTGRYEVLDILA
HQRIIDHHIRF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011575	XLOC_011575	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020634	TCONS_00020634	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000873	AMP-dep_Synth/Lig
IPR020845	AMP-binding_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.980		coord: 215..365 e-value: 2.2E-31 score: 108.2
None	No IPR available	GENE3D	3.30.300.30		coord: 471..575 e-value: 1.2E-9 score: 38.1
None	No IPR available	GENE3D	3.40.50.980		coord: 42..214 e-value: 1.7E-33 score: 115.3
None	No IPR available	GENE3D	2.30.38.10		coord: 380..469 e-value: 4.4E-7 score: 29.4
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 44..578
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 49..476 e-value: 4.0E-67 score: 226.5
IPR020845	AMP-binding, conserved site	PROSITE	PS00455	AMP_BINDING	coord: 209..220

Blast

[Close]

BLAST of TCONS_00020634-protein vs. Swiss-Prot (Human)
Match: S27A1 (Long-chain fatty acid transport protein 1 OS=Homo sapiens GN=SLC27A1 PE=2 SV=1)

HSP 1 Score: 522.702 bits (1345), Expect = 1.924e-179
Identity = 262/602 (43.52%), Postives = 376/602 (62.46%), Query Frame = 0

Query:   11 WSIYR---RTIRRDLRLVRIVAGLEKGIKRAIRRNHITSDIFDATALKHPNKIAVCSSDDLVQYTFTELKNLINQIANIFYDLGYRKNDVVILFMENRPEYVAFWLGLSKLGVVTSLVNYNLRRESLEHCIKVAGAKGIIFSAETEGALRDIQSEL-RGYEFYCYGSANR---IKEATDLPELIESTSTSNPPRPDNLTFYDKLIYMYTSGTTGLPKPAVIRHTRFFFMVNGMASAFKVTEDDINYVALPLYHSNGGVGGIGMMIYKGSTVIVAKKFSASKFFQDCAYHGATMFNYIGETCRYLLAQPPSRFDRAHRLRLAIGNGLRPQIWAEFKDRFSIDLIGECYASTEGNANMINIDNRIGAVGFNSVIAPGFYPIRLIRVDRSNGEIERDENGMAIACEPGEAGELVGRV-RNDPVHQFDGYVDKEATDKKIVHDIFVKGDSAFRSGDILLQDKEGYFYFQDRGGDTFRWKGENVGTAEVEGVITRILRMTDVVVYGVEIPGIEGRAGMACIADPDYIVDLVYLRNELLNKVPNYARPQFIRLSNGDAIEQTSTFKYKKVKLREEGFNPLKVVDDRLYFNNQRTGRYEVLDILAHQRI 604
            W   R   +T RRDL  + ++  +   ++R  R  H    IF A   + P ++A+  +     +TF +L    N +AN+F  LG+   DVV +F+E RPE+V  WLGL+K G+  +L+N NLRRE L  C+  +GAK +IF  E   A+ ++   L +    +C G       + +   L  L++  ST+   +  +    D+L Y+YTSGTTGLPK A++ H+R++ M      A+++   D+ Y  LPLYHS G + G+G  +  G TV++ KKFSAS+F+ DC  +  T+  YIGE CRYLL QP    +R HR+RLA+GNGLRP IW EF +RF +  IGE Y +TE N ++ N+D ++G+ GFNS I P  YPIRL++V+    E+ RD  G+ I C+ GE G LVG++ + DP+ +FDGYV + AT KKI H +F KGDSA+ SGD+L+ D+ GY YF+DR GDTFRW+GENV T EVEGV++R+L  TDV VYGV +PG+EG+AGMA +ADP  ++D   +  EL   +  YARP F+RL     ++ T TFK +K +L+ EGF+P +   DRL+F + + G Y  L+   + RI
Sbjct:   41 WRFLRIVCKTARRDLFGLSVLIRVRLELRRHQRAGHTIPRIFQAVVQRQPERLALVDAGTGECWTFAQLDAYSNAVANLFRQLGFAPGDVVAIFLEGRPEFVGLWLGLAKAGMEAALLNVNLRREPLAFCLGTSGAKALIFGGEMVAAVAEVSGHLGKSLIKFCSGDLGPEGILPDTHLLDPLLKEASTAPLAQIPSKGMDDRLFYIYTSGTTGLPKAAIVVHSRYYRMAAFGHHAYRMQAADVLYDCLPLYHSAGNIIGVGQCLIYGLTVVLRKKFSASRFWDDCIKYNCTVVQYIGEICRYLLKQPVREAERRHRVRLAVGNGLRPAIWEEFTERFGVRQIGEFYGATECNCSIANMDGKVGSCGFNSRILPHVYPIRLVKVNEDTMELLRDAQGLCIPCQAGEPGLLVGQINQQDPLRRFDGYVSESATSKKIAHSVFSKGDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGVLSRLLGQTDVAVYGVAVPGVEGKAGMAAVADPHSLLDPNAIYQELQKVLAPYARPIFLRLL--PQVDTTGTFKIQKTRLQREGFDP-RQTSDRLFFLDLKQGHYLPLNEAVYTRI 639

The following BLAST results are available for this feature:

BLAST of TCONS_00020634-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020634-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S27A1	1.924e-179	43.52	Long-chain fatty acid transport protein 1 OS=Homo ...	[more]

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TCONS_00020634-protein (polypeptide) - C. hemisphaerica