TCONS_00020559-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020559-protein
Unique NameTCONS_00020559-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length848

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020559-protein ID=TCONS_00020559-protein|Name=TCONS_00020559-protein|organism=Clytia hemisphaerica|type=polypeptide|length=848bp
KKSTLQTVQKTAIRCLQCNIRKYILVRNWEWWRLYTKVLPLLDVHRAERE
LLDKNSELGSLTSKISDLEGQNKTKDDENARLKKKVQEISSQLSAFHSSV
SGTGELLEQEASERFRLEEELEQSKMETERLSKQCHQLESELCEMKLSAI
SNGNYPTESDDEADDANVWRDKYKALSRELESTRRRMTDQAEEEIQDLMS
QKRSIEKQLTEEREESDEVRRQLQNSKRKLNKMTGEMEDMRLLLESVQGR
NSDLEKKQKRFDTDVTGLHDQMESDRTQLDTLQRERDRMASEKTQLNNTV
TQQEDEINQLKRKCERLTNELDDYGTSGKDDAELATVRRMIRDLESKTQD
QEEELDEQAGRIQQLEQAKLRLEMASQRDKQQFERDMEMKDEDIEKMKSD
CQRKIRDYEDQIQDEIQRKEEANKMKRDLERRIFDLQTTVEEVDRGTERK
LKKELRKYRTLYRDAKKAAESQSMKLNEQPEIKSLRNQLEDADFAKHMAL
KAKQQIENDMEELHNQIEAITRMKENAEERCLALSRENSDFQSRIEEAED
ELDEVIRKNKQLIAQLSEAQTMNVDLKERVNTLEEDKILLNEKINALSQK
LEVYQRDMVDKTEIERLEIKLQEAENKWEVEAQSRIKLEHQVNRLKGQIE
RIQDDKTELQNSVSRVQQNHSRVERQMKENKMELDSLKRQEAELKRRREE
AETNTQNMEDELSRKKTELTLAEKRIRLLQESMENDGFNSSDDEELFDED
SDTESISSSTSSRRRTSFRHSKRLSKRGSSDMSFETFSTSASQRRRRIPS
DDYIFPNGGLGTNGSLYGTESTTTPGRYQSRTASRSISKRVSRQNSFE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011539XLOC_011539Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020559TCONS_00020559Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002928Myosin_tail
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
Vocabulary: Molecular Function
TermDefinition
GO:0003774motor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016459 myosin complex
molecular_function GO:0003774 motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..92
NoneNo IPR availableCOILSCoilCoilcoord: 448..468
NoneNo IPR availableCOILSCoilCoilcoord: 334..439
NoneNo IPR availableCOILSCoilCoilcoord: 496..732
NoneNo IPR availableCOILSCoilCoilcoord: 166..257
NoneNo IPR availableCOILSCoilCoilcoord: 272..327
NoneNo IPR availableCOILSCoilCoilcoord: 107..141
NoneNo IPR availableGENE3D1.20.5.1000coord: 479..544
e-value: 0.042
score: 13.3
coord: 545..603
e-value: 0.0028
score: 17.1
NoneNo IPR availableGENE3D1.20.5.340coord: 376..442
e-value: 0.031
score: 14.1
NoneNo IPR availableGENE3D1.20.120.330coord: 604..736
e-value: 1.6E-7
score: 30.5
NoneNo IPR availableGENE3D1.20.5.170coord: 274..369
e-value: 6.3E-8
score: 32.1
NoneNo IPR availableGENE3D1.20.5.340coord: 40..148
e-value: 5.0E-9
score: 35.5
coord: 156..273
e-value: 3.9E-8
score: 32.6
NoneNo IPR availableGENE3D4.10.270.10coord: 1..39
e-value: 1.6E-4
score: 20.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 732..848
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 660..716
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 331..444
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 40..145
IPR002928Myosin tailPFAMPF01576Myosin_tail_1coord: 169..471
e-value: 1.6E-13
score: 49.4

Blast
[Close]
BLAST of TCONS_00020559-protein vs. Swiss-Prot (Human)
Match: MY18A (Unconventional myosin-XVIIIa OS=Homo sapiens GN=MYO18A PE=1 SV=3)

HSP 1 Score: 368.622 bits (945), Expect = 4.699e-109
Identity = 255/744 (34.27%), Postives = 461/744 (61.96%), Query Frame = 0 
Query:    8 VQKTAIRCLQCNIRKYILVRNWEWWRLYTKVLPLLDVHRAERELLDKNSELGSLTSKISDLEGQNKTKDDENARLKKKVQEISSQLSAFHSSVSGTGELLEQEASERFRLEEELEQSKMETERLSKQCHQLESELCEMKL--SAISNGNYPTESDDEADDANVWRDKYKALSRELESTRRRMTDQAEEEIQDLMSQKRSIEKQLTEEREESDEVRRQLQNSKRKLNKMTGEMEDMRLLLESVQGRNSDLEKKQKRFDTDVTGLHDQMESDRTQLDTLQRERDRMASEKTQLNNTVTQQEDEINQLKRKCERLTNELDDYGTS-GKDDAELATVRRMIRDLESKTQDQEEELDEQAGRIQQLEQAKLRLEMASQRDKQQFERDMEMKDEDIEKMKSDCQRKIRDYEDQIQDEIQRKEEANKMKRDLERRIFDLQTTVEEVDRGTERKLKKELRKYRTLYRDAKKAAESQSMKLNEQPEIKSLRNQLEDADFAKHMALKAKQQIENDMEELHNQIEAITRMKENAEERCLALSRENSDFQSRIEEAEDELDEVIRKNKQLIAQLSEAQTMNVDLKERVNTLEEDKILLNEKINALSQKLEVYQRDMVDKTEIERLEIKLQEAENKWEVEAQSRIKLEHQVNRLKGQIERIQDDKTELQNSVSRVQQNHSRVERQMKENKMELDSLKRQEAELKRRREEAETNTQNMEDELSRKKTELTLAEKRIRLLQESMENDGFNSSDDEELFD 748
            +Q  AIRC+Q NI+K   V++W WW+L+T V PL++V  +E ++ +K+ E+  L SK+   E +       + RL+ ++ E++S+L+   ++     +LL+ E +ER R E+E+++ + + + L KQ   +E E+ E +L  +A  NG    E DD+ D    WR KY+   RE++ T++R+  + E++++     KR +E++L + + +S+E +R LQ  K+K  ++T E++D +L LE  Q RN +LEKKQ+RFD++++  H++ + ++ Q + LQRE+D + +E   L   + +++ +I    +K   L  EL D  +   KD+A LA V++ +RDLE+K +DQEEELDEQAG IQ LEQAKLRLEM  +R +Q   ++ME +DE++E+ +  CQ+K++  E Q+++E + K++  + KR+LE ++  L   V   D  +E++L+K+L++ + L  DA+   +        + EI  L+NQLE+++F    A+KA++ +E ++E+LH QI+ I + K   EE+   L RE ++ Q+R+EE +++++E+++K+K  +AQ S       DL+ ++    ++K  L EK+ AL  ++E  ++ MVDK+ + R E K++E E + E E     +LE   +RLK  +E++ +++ +   + +R ++ + R++RQ+++ K E+  L R+EAE  R++ E E + +++E      + +L LA KRI  LQ ++E D   S ++E+L +
Sbjct: 1213 IQDLAIRCVQKNIKKNKGVKDWPWWKLFTTVRPLIEVQLSEEQIRNKDEEIQQLRSKLEKAEKERNELRLNSDRLESRISELTSELTDERNTGESASQLLDAETAERLRAEKEMKELQTQYDALKKQMEVMEMEVMEARLIRAAEING----EVDDD-DAGGEWRLKYERAVREVDFTKKRLQQEFEDKLEVEQQNKRQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQQVRNHELEKKQRRFDSELSQAHEEAQREKLQREKLQREKDMLLAEAFSLKQQLEEKDMDIAGFTQKVVSLEAELQDISSQESKDEASLAKVKKQLRDLEAKVKDQEEELDEQAGTIQMLEQAKLRLEMEMERMRQTHSKEMESRDEEVEEARQSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKLATLSDQVNRRDFESEKRLRKDLKRTKALLADAQLMLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEKQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKENMEKLTEERDQRIAAENREKEQNKRLQRQLRDTKEEMGELARKEAEASRKKHELEMDLESLEAANQSLQADLKLAFKRIGDLQAAIE-DEMESDENEDLIN 1950
The following BLAST results are available for this feature:
BLAST of TCONS_00020559-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MY18A4.699e-10934.27Unconventional myosin-XVIIIa OS=Homo sapiens GN=MY... [more]
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