TCONS_00020506-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020506-protein
Unique NameTCONS_00020506-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length664

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020506-protein ID=TCONS_00020506-protein|Name=TCONS_00020506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=664bp
MSGKEDPSTSLVPTKNISFRSLTVDTDSDIDPLGSTKSTPDINCLDKSVG
REASFFIRGGGIAGNNLAGKKSHILCTPSPSTLTRNFGQRRKTILNTFQL
SSRTKFNENDVYQLYRHTINEKGQEMYRAAWEAYEEDRNEDALKCIRKAL
VLMPEEADYFVLRGDIYLQMCDYKSAIMDYKHVCILSPDNAEYLSKLAFI
YYLQGQCYYDEELFLDALECFTRAAEMQPENSAYHSRSIACLLSLKRHKD
CMKMINERIDVETDNPDLLILRARLHLLFSNPTLAFFDIKDALEMDPANE
EADVMNTNLETRAEFFKERAIKLDMAGKTKEAIMKITMATDTNPEVLEYH
ILRAGMHRRNFDFNASVDDLLLAMDKCNYDVKSPIFIRAQKQLLLTFNDF
AIDCFRKGYYEEAVVLLEKAIQGEKHEPLFYINRGDCFYKLNHLHFAMLD
YQQAEEIDTNNKSVALRLSVVYNQMGLNEYASRKYYRSEDYFSLAIAHDC
RNAIFYLSRARARYMQEKVSEAQVDVISGLTLDPSNKDFLSIFDRLYPRE
KVQDVFSSPFGQLVQKALEEVIEENFPGEGLRAKDVRLTKKKSLPQIDSV
RAAVLEKIAHCMEDQEFHVEIIKGKKKVNELVETVIQSRIDLDYDGPKIA
KGVKPKSRTVSAKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011511XLOC_011511Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020506TCONS_00020506Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 428..461
e-value: 0.056
score: 22.6
coord: 469..502
e-value: 120.0
score: 5.4
coord: 198..231
e-value: 4.3E-4
score: 29.6
coord: 123..156
e-value: 25.0
score: 11.5
coord: 157..190
e-value: 0.0032
score: 26.7
coord: 313..346
e-value: 63.0
score: 8.0
coord: 503..536
e-value: 22.0
score: 11.9
coord: 266..299
e-value: 37.0
score: 10.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 394..427
score: 5.163
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 157..190
score: 8.821
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 266..299
score: 5.517
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 123..156
score: 6.195
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 428..461
score: 7.582
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 198..231
score: 10.591
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 469..502
score: 5.163
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 503..536
score: 5.428
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 151..203
e-value: 1.6E-11
score: 43.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 386..472
e-value: 1.2E-12
score: 47.3
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 473..550
e-value: 1.4E-6
score: 27.6
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 204..310
e-value: 8.5E-15
score: 54.1
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 127..309
coord: 401..539
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 313..407
NoneNo IPR availableGENE3D1.25.40.120coord: 311..383
e-value: 0.041
score: 12.4
NoneNo IPR availablePFAMPF13414TPR_11coord: 164..205
e-value: 9.7E-7
score: 28.3
NoneNo IPR availableGENE3D1.20.58.280coord: 119..150
e-value: 0.43
score: 10.2
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 123..536
score: 24.318

Blast
[Close]
BLAST of TCONS_00020506-protein vs. Swiss-Prot (Human)
Match: TTC16 (Tetratricopeptide repeat protein 16 OS=Homo sapiens GN=TTC16 PE=2 SV=2)

HSP 1 Score: 315.079 bits (806), Expect = 4.482e-96
Identity = 161/456 (35.31%), Postives = 270/456 (59.21%), Query Frame = 0 
Query:  118 TINEKGQEMYRAAWEAYEEDRNEDALKCIRKALVLMPEEADYFVLRGDIYLQMCDYKSAIMDYKHVCILSPDNAEYLSKLAFIYYLQGQCYYDEELFLDALECFTRAAEMQPENSAYHSRSIACLLSLKRHKDCMKMINERIDVETDNPDLLILRARLHLLFSNPTLAFFDIKDALEMDPANEEADVMNTNLETRAEFFKERAIKLDMAGKTKEAIMKITMATDTNPEVLEYHILRAGMHRRNFDFNASVDDLLLAMDKCNYDVKSPIFIRAQKQLLLTFNDFAIDCFRKGYYEEAVVLLEKAIQGEKHEPLFYINRGDCFYKLNHLHFAMLDYQQAEEIDTNNKSVALRLSVVYNQMGLNEYASRKYYRSEDYFSLAIAHDCRNAIFYLSRARARYMQEKVSEAQVDVISGLTLDPSNKDFLSIFDRLYPREKVQDVFSSPFGQLVQKALEEVIE 573
            T+  K +E Y    +  E+   E A+    +AL L P+  D++ LR + YLQ+CD+ SA  + +    L  DN ++L +L F+ YLQGQC +++  FLDAL  F+ AAE+QPE   +  R +ACLL+LK+H+ C+ +I   +  +T N D+ I RARL+     P L + D+  AL ++P + +A ++   +  +A+  ++ A  L + GK + A+ +I  A + NP      + R  M+RR  +F+ +V+D L  +D    D +  +  +AQ+QLLLT+NDFA+ C+R+G Y+E V+LL KA++ E+ E   YINRGDCF++L +L FA  DYQQA  +   ++    R+ ++  +MG  E   +++ ++E++FS AI H+ + A +YL RA++R + + +  A+ DV + L L+P       +   L+P   V++V S+    L +  LE+++E
Sbjct:   56 TVPLKVREYYSRGQQCLEQADWETAVLLFSRALHLDPQLVDFYALRAEAYLQLCDFSSAAQNLRRAYSLQQDNCKHLERLTFVLYLQGQCLFEQCAFLDALNVFSHAAELQPEKPCFRYRCMACLLALKQHQACLTLITNELKQDTTNADVYIFRARLYNFLQKPHLCYRDLHSALLLNPKHPQARMLLQKMVAQAQQARQDAGILAVQGKLQHALQRINRAIENNPLDPSLFLFRGTMYRRLQEFDGAVEDFLKVLDMVTED-QEDMVRQAQRQLLLTYNDFAVHCYRQGAYQEGVLLLNKALRDEQQEKGLYINRGDCFFQLGNLAFAEADYQQALALSPQDEGANTRMGLLQEKMGFCEQRRKQFQKAENHFSTAIRHNPQKAQYYLYRAKSRQLLQNIFGARQDVATVLLLNPKQPKLSLLMTNLFPGMSVEEVLSTQIAHLARLQLEQMVE 510
The following BLAST results are available for this feature:
BLAST of TCONS_00020506-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC164.482e-9635.31Tetratricopeptide repeat protein 16 OS=Homo sapien... [more]
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