TCONS_00020464-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020464-protein
Unique Name	TCONS_00020464-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	398

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020464-protein ID=TCONS_00020464-protein|Name=TCONS_00020464-protein|organism=Clytia hemisphaerica|type=polypeptide|length=398bp
MTFFAFRNAEEIPPEPPLPSLVDIKDLVEDELDEDVVNSMNCLGCFKDRA
KLTNSLLVKKKNVEKVIYFLLLDRKSRRPSTQDDVKALIYTSEVVKKRVD
SPNLNIARRSVNLTYQNGTYSMQRRPRAATTMSHKAEALTPNRRPSSLVV
NTPPGSPWRDRFFTLTKNIFHRSGDLSSESEDSPQSPPIEMVKRSWFPGS
LFNVGHPGSSLHRVLIKDRTLTEINADLIHSFLTMSSKVSHVPLENSKYR
LEYKKQGRFLLPASPLCTVMEISVEEPSSDELVDEMNRTKESLQYEVVFT
FESGSHRKFRKLCQKVQEALVNRGINRSSNSSGSVNDLHDFLLPSGTNEN
SPKTRARISVKSDDDENPLKVVPSQKRTPVRQRSFPDEDIMPLRTTIL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011504	XLOC_011504	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020464	TCONS_00020464	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015940	UBA

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..382
None	No IPR available	CDD	cd14340	UBA_BRSK	coord: 31..84 e-value: 5.31417E-24 score: 92.6937
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 31..73 score: 8.788

Blast

[Close]

BLAST of TCONS_00020464-protein vs. Swiss-Prot (Human)
Match: BRSK2 (Serine/threonine-protein kinase BRSK2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 7.396e-33
Identity = 112/384 (29.17%), Postives = 182/384 (47.40%), Query Frame = 0

Query:    1 MTFFAFRNAEEIPPEPPLPSLVDIKDLVE-DELDEDVVNSMNCLGCFKDRAKLTNSLLVKKKNVEKVIYFLLLDRKSRRPSTQDDVKALIYTSEVVKKRVDSPNLN------------------------IARRSVNLTYQNG--TYSMQRRPRAATTMSHKAEALTPNRRPSSLVVNTPPGS--------------------------PWRDRFFTLTKNI-----FHRSGDLSSESED----SPQSPPIEMVKRSWFPGSLFNVGHPGSSLHRVLIKDRTLTEINADLIHSFLTMSSKVSHVPLENSKYRLEYKKQGRFLLPASPLCTVMEISVEEPSSDELVDEMNRTKESLQYEVVFTFESGSHRKFRKLCQKVQEALVN 322
            + +   +N  E  PE P+P  V I+ L   +++D DV++SM+ LGCF+DR KL   LL +++N EK+IYFLLLDRK R PS +D+        +  +KRVDSP LN                         ARR++ +  Q+G  + S+       +T    +  +TP+  P    + TP G+                          PWR R  ++  +      FHR        E+    +P+S P E+ K+SWF G+  ++         V+IKD+ L+ I AD++H+FL++ S +SH  +  + +R EYK  G   +   P+   ++I+  E    +        KE+  Y V FT  SG  R+F+++ + +Q  L++
Sbjct:  268 IWYIGGKNEPE--PEQPIPRKVQIRSLPSLEDIDPDVLDSMHSLGCFRDRNKLLQDLLSEEENQEKMIYFLLLDRKERYPSQEDEDLPPRNEIDPPRKRVDSPMLNRHGKRRPERKSMEVLSVTDGGSPVPARRAIEMA-QHGQRSRSISGASSGLSTSPLSSPRVTPHPSPRGSPLPTPKGTPVHTPKESPAGTPNPTPPSSPSVGGVPWRARLNSIKNSFLGSPRFHRRKLQVPTPEEMSNLTPESSP-ELAKKSWF-GNFISLEKEEQIF--VVIKDKPLSSIKADIVHAFLSIPS-LSHSVISQTSFRAEYKATGGPAVFQKPVKFQVDITYTEGGEAQ--------KENGIYSVTFTLLSGPSRRFKRVVETIQAQLLS 635

The following BLAST results are available for this feature:

BLAST of TCONS_00020464-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020464-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BRSK2	7.396e-33	29.17	Serine/threonine-protein kinase BRSK2 OS=Homo sapi...	[more]

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TCONS_00020464-protein (polypeptide) - C. hemisphaerica