TCONS_00020430-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020430-protein
Unique Name	TCONS_00020430-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	525

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020430-protein ID=TCONS_00020430-protein|Name=TCONS_00020430-protein|organism=Clytia hemisphaerica|type=polypeptide|length=525bp
MEDNAGNDETDGGKLMIYAQQSSRLQKFRHYYQYPYFRLFVAYFVTFCNF
LIYAEDPVAHSYSKCEIPIIGNAFSFVVTKWPPNAFSLLKVLLCLTAIVI
GILVGKLVIHHLLLKRCFKLSMFSNDQGSWMICFLFTMICLVILSFVYNG
FLSLNDDMEPYKITGYIGAKNHVFMRAAAIGTWFGDFLTSWMVTDMMLQD
NQKYVKWATKIRVWWKEGLRRVYLFWVFFIVLTVMVIVIVSTDILNWDTF
NRDVFYTNEVGRSFLASFILVMDFTIVMQDWDFPLFQSNLDVKLPGVNTA
HIKFDIPKCLKRENWVIHITGKWFNYGILFIVMLLDLNMWKNQIFYNPLD
FGQYTGPEDKIYSVMDDWSLDRYKNETVYSYEWRLNNIDPITNQTYITAD
FRTNSRFRGKPLSIRGLAFIPSILVLLMFGVLIYIFGREGTSQFESPKKK
RQQNLSERVTGVRISQIDPDHTDGTVIELDPNNDEKQTSIQDEQKNETDN
VADSGHANYGSTASSPPVQRDNPVV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011476	XLOC_011476	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020430	TCONS_00020430	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029370	TMEM117

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029370	TMEM117 protein	PFAM	PF15113	TMEM117	coord: 27..438 e-value: 5.0E-179 score: 595.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..525

Blast

[Close]

BLAST of TCONS_00020430-protein vs. Swiss-Prot (Human)
Match: TM117 (Transmembrane protein 117 OS=Homo sapiens GN=TMEM117 PE=1 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 1.499e-141
Identity = 200/403 (49.63%), Postives = 278/403 (68.98%), Query Frame = 0

Query:   26 QKFRHYYQYPYFRLFVAYFVTFCNFLIYAEDPVAHSYSKCEIPIIGNAFSFVVTKWPPN-AFSLLKVLLCLTAIVIGILVGKLVIHHLLLKRCFKLSMFSNDQGSWMICFLFTMICLVILSFVYNGFLSLNDDMEPYKITGYIGAKNHVFMRAAAIGTWFGDFLTSWMVTDMMLQDNQKYVKWATKIRVWWKEGLRRVYLFWVFFIVLTVMVIVIVSTDILNWDTFNRDVFYTNEVGRSFLASFILVMDFTIVMQDWDFPLFQSNLDVKLPGVNTAHIKFDIP--KCLKRENWVIHITGKWFNYGILFIVMLLDLNMWKNQIFYNPLDFGQYTGPEDKIYSVMDDWSLDRYKNETVYSYEWRLNNIDPITNQTYITADFRTNSRFRGKPLSIRGLAFIPSILV 425
            + FR+Y+Q+P+ R+ VAY V F NFLI+AEDPV+HS ++  + ++GN FSFV  K+P    + +LKVLL L AI+ G++ GK + H  L  +  +L MF  D GSWM  F  T++ L I S +YN  L ++ +M  Y IT Y+G +N  FM+ AA+GTW GDF+T+WMVTDMMLQD + Y  W    R +WK+G  R+ LFW     LT +V+++++TD ++WD  NR    ++EV R+FLASFILV D  IVMQDW+FP F  ++DV LPG++T H++F IP  + + +E + IHITGKWFNYGI+F+V++LDLNMWKNQIFY P ++GQY GP  KIY+V D  SL    N T  S+EWR N+ +P TN+TY+  D   +SRF G  L ++ LAF+PS++ 
Sbjct:    3 KDFRYYFQHPWSRMIVAYLVIFFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPRGVGWRILKVLLWLLAILTGLIAGKFLFHQRLFGQLLRLKMFREDHGSWMTMFFSTILFLFIFSHIYNTILLMDGNMGAYIITDYMGIRNESFMKLAAVGTWMGDFVTAWMVTDMMLQD-KPYPDWGKSARAFWKKGNVRITLFWTVLFTLTSVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVFDLLIVMQDWEFPHFMGDVDVNLPGLHTPHMQFKIPFFQKIFKEEYRIHITGKWFNYGIIFLVLILDLNMWKNQIFYKPHEYGQYIGPGQKIYTVKDSESLKDL-NRTKLSWEWRSNHTNPRTNKTYVEGDMFLHSRFIGASLDVKCLAFVPSLIA 403

The following BLAST results are available for this feature:

BLAST of TCONS_00020430-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020430-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TM117	1.499e-141	49.63	Transmembrane protein 117 OS=Homo sapiens GN=TMEM1...	[more]

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TCONS_00020430-protein (polypeptide) - C. hemisphaerica