TCONS_00020429-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020429-protein
Unique NameTCONS_00020429-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length557

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020429-protein ID=TCONS_00020429-protein|Name=TCONS_00020429-protein|organism=Clytia hemisphaerica|type=polypeptide|length=557bp
MTTDSDNSDIDVCTVEDDNCLHTGLTVVAAETYIETDTSDNIEQVVPLTD
KDLLTKSKAEQIAKEKQAKKQEKYRKTSTDKKSQDSSSKKDTDNGTEPDK
KVPPLVIKIDKKLITETQAPSEVKIPTKKKRNYEESINSINEGFVSTSSL
ENYEDDLMDAGVSNEFKQFPMESIQLAMKNNRDYQKLLKTLTVLEAQRVQ
AVKDYEELNRLKEMALADPLDFVKKIQEKTAPEFPKRQQVAKTPEINWLH
YLTAYSNETILPQITTRNSSKETDPFDEFNELDIFDDMSSNSQDKAVRSN
EKTATFNQKWSVEEQEKLEKLLVMYPPEEVEARRWEKIAKGLGTRTAQQV
SSRIQKYFLKLAKAKLPIPGRAPSSASMNITKKKINPISYRRSTFFPTWQ
PSVFMKDDGEMGTSQSSVFYDDIEVSDEEDVPRELRDSPEYKELMELKRI
KKYKEVFNEQTSTGITIHRGFMCDNCSTDPIVGVRWHCTGCPQDQENSLD
FCNNCYQKPFENGTHTIDHQLIPIYEATEAAVDESYTTFEQKKFKYNYLD
PNFVPTT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011475XLOC_011475Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020429TCONS_00020429Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..211
NoneNo IPR availableGENE3D1.10.10.60coord: 300..366
e-value: 2.4E-13
score: 49.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..102
NoneNo IPR availableCDDcd00167SANTcoord: 309..358
e-value: 3.48694E-8
score: 49.4962
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 464..525
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 467..517
e-value: 6.1E-5
score: 32.4
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 467..515
e-value: 4.7E-8
score: 32.6
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 467..519
score: 10.835
IPR001005SANT/Myb domainSMARTSM00717santcoord: 306..360
e-value: 1.0E-8
score: 45.0
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 308..357
e-value: 1.2E-10
score: 41.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 302..362
score: 10.231
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 305..359

Blast
[Close]
BLAST of TCONS_00020429-protein vs. Swiss-Prot (Human)
Match: ZZZ3 (ZZ-type zinc finger-containing protein 3 OS=Homo sapiens GN=ZZZ3 PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 6.008e-85
Identity = 172/418 (41.15%), Postives = 244/418 (58.37%), Query Frame = 0 
Query:  171 MESIQLAMKNNRDYQKLLKTLTVLEAQRVQAVKDYEELNRLKEMALADPLDFVKKIQEKTAPEFPKRQQVAKTPEINW---LHYLTAYSNETILPQITTRN----------SSKETDPFD--------EFNELDIFDD-MSSNSQDKAVRS----NEKTATFNQKWSVEEQEKLEKLLVMYPPEEVEARRWEKIAKGLGTRTAQQVSSRIQKYFLKLAKAKLPIPGRAPS---SASMNITKKKINPIS---YRRSTFFPTWQPSVFMKDDGEMGTSQSSVFYDDIEVSDEEDVPRELRDSPEYKELMELKRIKKYKEVFNEQTSTGITIHRGFMCDNCSTDPIVGVRWHCTGCPQDQENSLDFCNNCYQKPFENGTHTIDHQLIPIYEATEAAVDESYTTFEQKKFKYNYLDPNFVPT 556
             ES  +A+K+N+DYQ+LL+T+ VLEAQR QAV+D E L R +  AL +P+ FV+K+Q+K     P  Q+V + PEI W    H L  +  E    +  TR            ++   P D         ++ L + D    S+S+ + +R     + K  TFNQ W+VEEQ+KLE+LL+ YPPEEVE+RRW+KIA  LG RTA+QV+SR+QKYF+KL KA +P+PGR P+    +  + T ++ +P++   ++ STF  + +P V+M +D +     S +     + SD+E +P   R+ PEYKEL++ K++KK K     Q  +G   H GF CDNC  +PI GVRWHC  CP   E SLDFC++C     E   H  DHQL PIY  +E  +D  Y     +   YNYLDPN+ P 
Sbjct:  490 FESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIGFVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVKLVFDKVGLPARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIPVPGRTPNLYIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTAVEDASDDESIPIMYRNLPEYKELLQFKKLKKQKLQ-QMQAESGFVQHVGFKCDNCGIEPIQGVRWHCQDCP--PEMSLDFCDSCSDCLHETDIHKEDHQLEPIYR-SETFLDRDYCV--SQGTSYNYLDPNYFPA 901
The following BLAST results are available for this feature:
BLAST of TCONS_00020429-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZZZ36.008e-8541.15ZZ-type zinc finger-containing protein 3 OS=Homo s... [more]
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