TCONS_00020287-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020287-protein
Unique Name	TCONS_00020287-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	534

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020287-protein ID=TCONS_00020287-protein|Name=TCONS_00020287-protein|organism=Clytia hemisphaerica|type=polypeptide|length=534bp
MTWTDICLCAAVLLVTLHFCWLLFTRLPAGCQIAVLPHNIPLFGNIWLFF
NRPWFNTQKQKWFREYKDSFIVWFFTRHALFTRDIKIFEKILSSPKHLSK
GLDGYWVLEEWLGNGLILSDGPLWRKRRKLITPTFHFDTLNQFMRIMDEQ
SKELVRILSSMSGGGGVDQKVNVFDVTKPFSMSIICQTAMGLQLPQKESG
DGRYDRWFQMVGERMFQYIVYPWLWSKRLSVMTKDGSILSSALNNLHQFV
KTLIEKRIESRKECYLNSEKSLMGGTSDRKNGFVSSLHNVDSNHGNLTGK
ATKNRILIDTLLDAYESGDIDITGILNEVNTFVNAGFETTSTALAWCLYL
LGRNIGCQQKLWEELNEYKERHQGTNTIFSIQDLTELKYTDAVIKESMRI
HPPVPVIARTLSENVEYDGGVIPSGIVIFDIVSMNRNQDLWEEPMSFKPE
RFLEKFYGDSNNARSRSSFSYIPFSAGPRNCVGQRFALAELKIALFHLVL
KFNFTSVQCEKELEETFDFFHGSDNGLWLQFEER

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011389	XLOC_011389	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020287	TCONS_00020287	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002401	Cyt_P450_E_grp-I
IPR001128	Cyt_P450
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 391..409 score: 34.06 coord: 471..481 score: 53.31 coord: 324..341 score: 32.58 coord: 481..504 score: 31.03 coord: 344..370 score: 24.41 coord: 430..454 score: 34.02
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 335..352 score: 45.07 coord: 392..403 score: 42.55 coord: 472..481 score: 60.79 coord: 481..492 score: 45.15
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 37..510 e-value: 5.9E-82 score: 275.8
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 307..534 coord: 37..264
None	No IPR available	GENE3D	1.10.630.10		coord: 21..534 e-value: 2.5E-106 score: 355.6
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 474..483

Blast

[Close]

BLAST of TCONS_00020287-protein vs. Swiss-Prot (Human)
Match: CP4V2 (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.686e-68
Identity = 148/451 (32.82%), Postives = 233/451 (51.66%), Query Frame = 0

Query:   89 EKILSSPKHLSKGLDGYWVLEEWLGNGLILSDGPLWRKRRKLITPTFHFDTLNQFMRIMDEQSKELVRILSSMSGGGGVDQKV-NVFDVTKPFSMSIICQTAMGLQLPQKESGDGRYDRWFQMVGERMFQYIVYPWLWSKRLSVMTKDGSILSSALNNLHQFVKTLIEKR---IESRKECYLNSEKSLMGGTSDRKNGFVSSLHNVDSNHGNLTGKATKNRILIDTLLDAYESGDIDITGILNEVNTFVNAGFETTSTALAWCLYLLGRNIGCQQKLWEELNEYKERHQGTNTIFSIQDLTELKYTDAVIKESMRIHPPVPVIARTLSENVEYDGGVIPSGI-VIFDIVSMNRNQDLWEEPMSFKPERFLEKFYGDSNNARSRSSFSYIPFSAGPRNCVGQRFALAELKIALFHLVLKFNFTSVQCEKELEETFDFFHGSDNGLWLQFEER 534
            E IL+S K + K    Y  LE WLG GL+ S G  WR RRK++TPTFHF  L  F+ IM+EQ+  LV+ L        ++Q+  N F      ++ IIC+TAMG  +  + + D  Y R    + E +F+ I  PWLW     +M K+G     +L  LH F  ++I +R   + + ++C  +   S    + +++  F+  L +V  + GN                       +    I  EV+TF+  G +TT+ A+ W LYLLG N   Q+K+  EL++   +     T   ++DL +L+Y + VIKE++R+ P VP+ AR++SE+ E  G  +  G   +    +++R+   +  P  F+PERF  +      NA+ R  ++Y+PFSAGPRNC+GQ+FA+ E K  L  ++  F   S Q  +EL           NG+W++ + R
Sbjct:  109 EVILTSSKQIDKS-SMYKFLEPWLGLGLLTSTGNKWRSRRKMLTPTFHFTILEDFLDIMNEQANILVKKLEK-----HINQEAFNCFFYITLCALDIICETAMGKNIGAQSNDDSEYVRAVYRMSEMIFRRIKMPWLWLDLWYLMFKEGWEHKKSLQILHTFTNSVIAERANEMNANEDCRGDGRGS--APSKNKRRAFLDLLLSVTDDEGN----------------------RLSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPAT---VEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPE------NAQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHFWIESNQKREELGLEGQLILRPSNGIWIKLKRR 520

The following BLAST results are available for this feature:

BLAST of TCONS_00020287-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020287-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP4V2	1.686e-68	32.82	Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1...	[more]

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TCONS_00020287-protein (polypeptide) - C. hemisphaerica