TCONS_00020216-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020216-protein
Unique NameTCONS_00020216-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length546

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020216-protein ID=TCONS_00020216-protein|Name=TCONS_00020216-protein|organism=Clytia hemisphaerica|type=polypeptide|length=546bp
MPANVCGHDVDNLLTGASFEELTNQNISPQEESEPNGNEELPEGERDGGD
TLLEDDIIKAALCALQTPSSTPDSSPSRGEDLNANKEESESDYVIEVDDL
PSSEGTLTANEDSDNELSTNQNIDDELSTNQSTVNIELQFDDEEVPLHKD
TFHEEGSLSKMENFVTSIPLVKPPPMIIPPTQPVSLPQNARTHPMQIRPQ
TAFQRNHNATHPPQRIMYIQYIPVAAQPPQMMTQFMQPPSFVPRPQIAPV
SITPATRPVVNATPSINPITTTKPKPTENKSDEDDDDDVPLAKISNVTSL
KMSTNLNGTLHSTEVERSHICDVCGAGFQWRSHLRRHQKTHTNEKFECDI
CHAGFGQQSYFNAHYKSHFNDKPYKCEACGKRFVQSTHLKIHLMIHTGEK
PYQCQYCKARFTQHGNLKRHIRVHTGERPYPCTECPSSFTHSSDLTRHIR
IHTGEKPYKCAHCSSAFATNGNLKSHLKIHTNANVNPFKCSLCHSAFNLE
SYLKLHMRTHIHERPFVCACGETFDQGLNFNFHLKLRVSPFCSQVT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011349XLOC_011349Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020216TCONS_00020216Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 374..396
e-value: 0.0019
score: 27.4
coord: 430..452
e-value: 6.8E-4
score: 28.9
coord: 458..480
e-value: 0.005
score: 26.1
coord: 346..368
e-value: 0.036
score: 23.2
coord: 488..510
e-value: 0.012
score: 24.7
coord: 319..341
e-value: 0.0015
score: 27.8
coord: 402..424
e-value: 2.1E-4
score: 30.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 460..480
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 348..368
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 432..452
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 490..512
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 404..424
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 376..396
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 321..341
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 488..515
score: 13.734
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 430..457
score: 16.81
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 458..485
score: 12.196
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 319..346
score: 13.609
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 402..429
score: 16.082
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 346..373
score: 12.217
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 374..401
score: 16.955
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 317..368
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 466..521
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 411..467
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 355..411
NoneNo IPR availableGENE3D3.30.160.60coord: 186..330
e-value: 5.8E-11
score: 41.8
coord: 509..536
e-value: 5.1E-5
score: 22.8
NoneNo IPR availableGENE3D3.30.160.60coord: 444..475
e-value: 2.2E-21
score: 75.5
NoneNo IPR availableGENE3D3.30.160.60coord: 495..508
e-value: 1.1E-7
score: 31.3
NoneNo IPR availableGENE3D3.30.160.60coord: 379..393
e-value: 5.8E-15
score: 54.6
NoneNo IPR availableGENE3D3.30.160.60coord: 331..356
e-value: 2.3E-13
score: 49.5
NoneNo IPR availableGENE3D3.30.160.60coord: 419..443
e-value: 1.6E-22
score: 78.7
coord: 394..418
e-value: 8.8E-22
score: 76.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 430..452
e-value: 1.8E-5
score: 24.8
coord: 374..396
e-value: 3.4E-4
score: 20.8
coord: 402..424
e-value: 5.4E-5
score: 23.3
coord: 458..480
e-value: 0.0012
score: 19.1
NoneNo IPR availableGENE3D2.30.30.380coord: 476..494
e-value: 2.1E-4
score: 20.9
coord: 357..378
e-value: 1.2E-9
score: 37.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..290

Blast
BLAST of TCONS_00020216-protein vs. Swiss-Prot (Human)
Match: ZN239 (Zinc finger protein 239 OS=Homo sapiens GN=ZNF239 PE=1 SV=3)

HSP 1 Score: 206.838 bits (525), Expect = 1.342e-60
Identity = 101/223 (45.29%), Postives = 135/223 (60.54%), Query Frame = 0
Query:  316 ERSHICDVCGAGFQWRSHLRRHQKTHTNEK-FECDICHAGFGQQSYFNAHYKSHFNDKPYKCEACGKRFVQSTHLKIHLMIHTGEKPYQCQYCKARFTQHGNLKRHIRVHTGERPYPCTECPSSFTHSSDLTRHIRIHTGEKPYKCAHCSSAFATNGNLKSHLKIHTNANVNPFKCSLCHSAFNLESYLKLHMRTHIHERPFVCA-CGETFDQGLNFNFHLKL 536
            E+ + C+ CG GF   S L  HQ  HT+EK ++CD C  GF + S    H+  H  +KPYKC+ CGK F QS+ L IH  +HTGEKPY+C+ C   F+Q  NL  H RVHTGERPY C EC   F+ SS+L  H  IHTGEKPY+C  C   F+ + +L+ HL++HT     P+ C  C   F+  S L +H R H  E+P+ C+ CG+ F Q  N + H ++
Sbjct:  232 EKPYKCEQCGKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSSNLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGE--KPYHCGKCGKGFSQSSKLLIHQRVHTGEKPYECSKCGKGFSQSSNLHIHQRV 452          

HSP 2 Score: 182.956 bits (463), Expect = 1.139e-51
Identity = 88/196 (44.90%), Postives = 115/196 (58.67%), Query Frame = 0
Query:  316 ERSHICDVCGAGFQWRSHLRRHQKTHTNEK-FECDICHAGFGQQSYFNAHYKSHFNDKPYKCEACGKRFVQSTHLKIHLMIHTGEKPYQCQYCKARFTQHGNLKRHIRVHTGERPYPCTECPSSFTHSSDLTRHIRIHTGEKPYKCAHCSSAFATNGNLKSHLKIHTNANVNPFKCSLCHSAFNLESYLKLHMRTH 510
            E+ + CD CG GF   S L  H   HT EK ++CD C  GF Q S  + H + H  +KPY+CE CG  F Q ++L IH  +HTGE+PY+C  C   F+Q  NL  H  +HTGE+PY C EC   F+ SSDL  H+R+HTGEKPY C  C   F+ +  L  H ++HT     P++CS C   F+  S L +H R H
Sbjct:  260 EKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSSNLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLIHQRVHTGEK--PYECSKCGKGFSQSSNLHIHQRVH 453          

HSP 3 Score: 172.555 bits (436), Expect = 6.706e-48
Identity = 87/202 (43.07%), Postives = 116/202 (57.43%), Query Frame = 0
Query:  337 HQKTHTNEK-FECDICHAGFGQQSYFNAHYKSHFNDKPYKCEACGKRFVQSTHLKIHLMIHTGEKPYQCQYCKARFTQHGNLKRHIRVHTGERPYPCTECPSSFTHSSDLTRHIRIHTGEKPYKCAHCSSAFATNGNLKSHLKIHTNANVNPFKCSLCHSAFNLESYLKLHMRTHIHERPFVC-ACGETFDQGLNFNFHLKL 536
            ++K HT EK +EC  C   F Q S    H + H  +KPYKCE CGK F +S+ L IH  +HT EKPY+C  C   FT+  +L  H  VHTGE+PY C +C   F+ SS L  H R+HTGEKPY+C  C  +F+   NL  H ++HT     P+KC  C   F+  S L +H   H  E+P+ C  CG+ F Q  +   HL++
Sbjct:  197 YEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQCGKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGE--RPYKCGECGKGFSQSSNLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRV 396          

HSP 4 Score: 121.324 bits (303), Expect = 1.427e-29
Identity = 68/184 (36.96%), Postives = 91/184 (49.46%), Query Frame = 0
Query:  354 GFGQQSYFNAHYKSHFNDKPYKCEACGKRFVQSTHLKIHLMIHTGEKPYQCQYCKARFTQHGNLKRHIRVHTGERPYPCTECPSSFTHSSDLTRHIRIHTGEKPYKCAHCSSAFATNGNLKSHLKIHTNANVNPFKCSLCHSAFNLESYLKLHMRTHIHERPFVC-ACGETFDQGLNFNFHLKL 536
            G+  Q    +  ++H  +KP     CGK    S     +  IHT EK Y+C  C   F+Q   L  H R HT E+PY C +C   FT SS L  H  +HT EKPYKC  C   F  + +L  H  +HT     P+KC  C   F+  S L +H R H  E+P+ C  CG +F Q  N + H ++
Sbjct:  159 GWKSQVVSCSQQRAHTEEKPCDHNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQCGKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGE--KPYKCDKCGKGFSQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRV 340          
The following BLAST results are available for this feature:
BLAST of TCONS_00020216-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2391.342e-6045.29Zinc finger protein 239 OS=Homo sapiens GN=ZNF239 ... [more]
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