TCONS_00020200-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020200-protein
Unique NameTCONS_00020200-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length616

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020200-protein ID=TCONS_00020200-protein|Name=TCONS_00020200-protein|organism=Clytia hemisphaerica|type=polypeptide|length=616bp
MHSTWRYISCVVCLILAPHFTAADIEKTTTYNISTGQIGSSFLLNCKYEG
FSNQTLVSLQWQLDNLLIYYRQFEKNRGRTIQDMEQFFDVNVNSQPLLTT
SSLKLEILRQHFSGTYKCIKSVRIQRFNSKLNKTEDETKVFTEIHSVIFE
KVDFLRQLRDEINETCYSPKFASPKNARLIWVKEAQLDDEQADLQYNNGT
IIRDLSKLDERLRLDSLTLLDTGTYACYDRGFKVRSFSLLVLDHVTAPES
ESLVIPCGRTNKADIHMISKDNDIIYFDGEIRWQTEIYSLNEKGHLVLSS
AVPEDSGIYKCYGLNSLYKVLNVTVEGDLTERNISIRNIEKVALTSSKLD
IELSEDVNLVCTFTPGLWRVLYFLHNDVIIHVETIKKEWSQIDMSRHKHE
LTDSIYTLHLDNTTTKDLGRYKCRVQYEFHMTESAEVVIKSSKPASRNII
LPIKNDNDTSSHSIFCSLPVLENQPVFWFKNGHPLHLGDQNLEPNNGYIN
NMTTYVFNTDWGFNGIYDCYSGDRHLPFDVIYSFNLTALPPNATTDGVSR
APDDDEIHDNLTIKGSHVVNHPGDNLTLTCDGLKADNVVVYWFFGEQLIL
MRSSYENYTWTESDNY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011344XLOC_011344Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020200TCONS_00020200Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 346..440
e-value: 0.11
score: 21.6
coord: 242..326
e-value: 0.0013
score: 28.0
coord: 31..143
e-value: 46.0
score: 5.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 147..240
e-value: 0.015
score: 14.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 557..616
e-value: 0.017
score: 14.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 457..525
e-value: 0.045
score: 13.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 241..354
e-value: 1.2E-5
score: 24.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 355..451
e-value: 2.5E-7
score: 30.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 26..140
e-value: 1.0E-5
score: 24.9
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 165..227
score: 7.631
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 18..118
score: 8.448
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 340..438
score: 7.74
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 166..242
coord: 111..118
coord: 32..68
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 237..321
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 352..431
NoneNo IPR availableCDDcd00096Igcoord: 253..320
e-value: 0.00626272
score: 34.3871

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020200-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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