TCONS_00020144-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020144-protein
Unique Name	TCONS_00020144-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	505

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020144-protein ID=TCONS_00020144-protein|Name=TCONS_00020144-protein|organism=Clytia hemisphaerica|type=polypeptide|length=505bp
MIFELVAFGLFAYLVLKFYWLHVTRPWSHISNIPLQIYPILGHIPSVIGF
TANEFHHLFLDWLDRSPITALWIGLRPNVLCKDVKLFESIMSSNKVLTKS
SNYWVFDDWLGLNLFTSTGAFWRRRRKLLTPSFHFNILTEFLPTMVKHSQ
DLVKALKKQPDSFNAFKVMKTYSLGVILETSMGVENDFIDIALDVANNET
VKDSPGEHQANIFRFLKAIDRLLVILVNRNDRPWQWYKTTFQLTPVGQDF
YETLDFVKKFGTNIIEKRIEQLKEKPMSDEKQIILLDRLLKSLQNGEVNV
EDVLNETQGFMFAGYDTVATALSWCLFMIGSHPEIQQKAFEEVKNVEKLN
LPLNEMVKELKYVECVIKETLRIHPSAPIVSREIEEEMVFDSWKFPKGTT
FSICILAMQRDPNNWSDPMVFKPERFGSPEHDWNPFAFIPFSAGPRNCIG
QRFAMMEMKCTLYHLLLNFEIVAKQRAEDLLETIGVIHGVMNEEGLQIEM
KPRNL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011317	XLOC_011317	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020144	TCONS_00020144	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450
IPR002401	Cyt_P450_E_grp-I
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 286..306
None	No IPR available	GENE3D	1.10.630.10		coord: 18..505 e-value: 5.9E-108 score: 361.0
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 448..459 score: 46.24 coord: 439..448 score: 60.79 coord: 313..330 score: 35.06 coord: 365..376 score: 43.23
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 37..494 e-value: 2.1E-85 score: 287.1
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 38..503
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 448..471 score: 31.77 coord: 404..428 score: 31.47 coord: 438..448 score: 56.39 coord: 302..319 score: 23.12 coord: 364..382 score: 30.75 coord: 322..348 score: 28.97
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 441..450

Blast

[Close]

BLAST of TCONS_00020144-protein vs. Swiss-Prot (Human)
Match: CP4V2 (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 1.967e-83
Identity = 174/505 (34.46%), Postives = 272/505 (53.86%), Query Frame = 0

Query:   24 TRPWSHISNIP--LQIYPILGHIPSVIGFTANEFHHLFLDWLDRS---PITALWIGLRPNVLCKDVKLFESIMSSNKVLTKSSNYWVFDDWLGLNLFTSTGAFWRRRRKLLTPSFHFNILTEFLPTMVKHSQDLVKALKKQ--PDSFNAFKVMKTYSLGVILETSMGVENDFIDIALDVANNETVKDSPGEHQANIFRFLKAIDRLLVILVNRNDRPWQWYKTTFQLTPVGQDFYETLDFVKKFGTNIIEKRIEQL----------KEKPMSDEKQIILLDRLLKSLQNGEVNV---EDVLNETQGFMFAGYDTVATALSWCLFMIGSHPEIQQKAFEEVKNV-EKLNLPLN-EMVKELKYVECVIKETLRIHPSAPIVSREIEEEMVFDSWKFPKGTTFSICILAMQRDPNNWSDPMVFKPERFGSPE--HDWNPFAFIPFSAGPRNCIGQRFAMMEMKCTLYHLLLNFEIVAKQRAEDLLETIGVIHGVMNEEGLQIEMKPRN 504
             R W  +  IP   + YP++GH   ++     EF    +++ +     P+  LW+G  P V   + +  E I++S+K + KSS Y   + WLGL L TSTG  WR RRK+LTP+FHF IL +FL  M + +  LVK L+K    ++FN F  +   +L +I ET+MG                    + G    +   +++A+ R+  ++  R   PW W    + +   G +  ++L  +  F  ++I +R  ++          +    S  K+   LD LL S+ + E N    ED+  E   FMF G+DT A A++W L+++GS+PE+Q+K   E+ +V  K + P   E +K+L+Y+ECVIKETLR+ PS P+ +R + E+     ++  KGT   I   A+ RDP  + +P  F+PERF  PE     +P+A++PFSAGPRNCIGQ+FA+ME K  L  +L +F I + Q+ E+L     +I    N  G+ I++K RN
Sbjct:   41 ARKWQQMRPIPTVARAYPLVGH-ALLMKPDGREFFQQIIEYTEEYRHMPLLKLWVGPVPMVALYNAENVEVILTSSKQIDKSSMYKFLEPWLGLGLLTSTGNKWRSRRKMLTPTFHFTILEDFLDIMNEQANILVKKLEKHINQEAFNCFFYITLCALDIICETAMG-------------------KNIGAQSNDDSEYVRAVYRMSEMIFRRIKMPWLWLDLWYLMFKEGWEHKKSLQILHTFTNSVIAERANEMNANEDCRGDGRGSAPSKNKRRAFLDLLL-SVTDDEGNRLSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERF-FPENAQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHFWIESNQKREELGLEGQLILRPSN--GIWIKLKRRN 521

The following BLAST results are available for this feature:

BLAST of TCONS_00020144-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020144-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP4V2	1.967e-83	34.46	Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1...	[more]

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TCONS_00020144-protein (polypeptide) - C. hemisphaerica