TCONS_00020138-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020138-protein
Unique NameTCONS_00020138-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length282

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020138-protein ID=TCONS_00020138-protein|Name=TCONS_00020138-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MGGKSTKQKWEHIDQNENSMVETRKSPNRPRGQNGSFLGTNFADTLPPPP
GAEIDQSKTGTDGLDGAPSLKRGSSKRSSWRRGSSAFSKFGNSIRRSSQM
GKVQSKIPPSELKDLLTRTHFTENELKEWYSGFKRDCPDGRLTLEQFTNI
YSEFYGTHEAKKFAEHLFRTFDVNQDGRIDFREFICSLSITTRGSFEEKL
RWAFDVYDIDGNGVISFNEVLAIVRSINKMMGYINDKNASTERIQDVFKN
FDKNQDQMLSLEEFIEGAKRDQTFVKMLQCTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011312XLOC_011312Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020138TCONS_00020138Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 167..188
score: 63.11
coord: 259..279
score: 50.37
coord: 121..140
score: 61.35
coord: 213..231
score: 50.2
coord: 191..210
score: 58.65
coord: 107..121
score: 33.08
NoneNo IPR availableGENE3D1.10.238.110coord: 100..196
e-value: 1.9E-32
score: 111.6
NoneNo IPR availableGENE3D1.10.238.10coord: 222..273
e-value: 2.7E-12
score: 45.9
NoneNo IPR availableGENE3D1.10.238.10coord: 197..221
e-value: 7.6E-8
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..85
IPR002048EF-hand domainSMARTSM00054efh_1coord: 199..227
e-value: 1.2E-6
score: 38.1
coord: 243..271
e-value: 0.011
score: 25.0
coord: 163..191
e-value: 0.6
score: 19.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 197..266
e-value: 3.1E-13
score: 49.9
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 166..184
e-value: 6.2E-5
score: 22.2
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 195..230
score: 14.29
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 239..274
score: 11.808
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 159..194
score: 12.7
IPR002048EF-hand domainCDDcd00051EFhcoord: 199..269
e-value: 8.0462E-13
score: 60.6393
IPR002048EF-hand domainCDDcd00051EFhcoord: 164..225
e-value: 4.27659E-13
score: 61.4097
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 252..264
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 208..220
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 172..184
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 100..279

Blast
[Close]
BLAST of TCONS_00020138-protein vs. Swiss-Prot (Human)
Match: NCALD (Neurocalcin-delta OS=Homo sapiens GN=NCALD PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 3.808e-68
Identity = 98/185 (52.97%), Postives = 132/185 (71.35%), Query Frame = 0 
Query:  100 MGKVQSKIPPSELKDLLTRTHFTENELKEWYSGFKRDCPDGRLTLEQFTNIYSEFYGTHEAKKFAEHLFRTFDVNQDGRIDFREFICSLSITTRGSFEEKLRWAFDVYDIDGNGVISFNEVLAIVRSINKMMGYI----NDKNASTERIQDVFKNFDKNQDQMLSLEEFIEGAKRDQTFVKMLQC 280
            MGK  SK+ P  ++DLL  T FTE+E++EWY GF RDCP G L++E+F  IY  F+   +A KFAEH+FRTFD N DG IDFREFI +LS+T+RG  E+KL+WAF +YD+DGNG IS  E+L IV++I KM+  +     D++   +R + +F+  D N+D  LSLEEFI GAK D + V++LQC
Sbjct:    1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLLQC 185
The following BLAST results are available for this feature:
BLAST of TCONS_00020138-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCALD3.808e-6852.97Neurocalcin-delta OS=Homo sapiens GN=NCALD PE=1 SV... [more]
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