TCONS_00020132-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020132-protein
Unique NameTCONS_00020132-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length688

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020132-protein ID=TCONS_00020132-protein|Name=TCONS_00020132-protein|organism=Clytia hemisphaerica|type=polypeptide|length=688bp
RNFAFSGFESHRWRSVGKSFSKLENIENKSHRTRKSEKLRTRDWKVRNKS
RSVFRLYEEATTVLGHLLHMFSIFPPKLRHNKQYYFPWSLEQIFLYEKRY
ASYKVSLTKIRKTKSKHKHEEDKLKMAAELQGWRKNILQQLETRKAVEIR
PFQELIESHNKLITAGSATKIRNQELEHQSYQLKQEIHELQGKVAVGNTG
SPLSGNEKYLEQKIFKLQEEVTELHRNKGENAQKIIQLTAELKEKDEIIS
SKEAHILDAQNNQDAMAFESRKLQLTISELESTNQMLKDEHQALQMLHSS
LETKINKLQEDNMQLVERWMQEKAKVADQINFENEMVASLRQKKLQQQLQ
DAANEPIQIKATSYSKSPDRTGSFHLPVPAYVCITSVPDRARHTMDNAHD
GEVSSLRFSISGKYFVSGGADRKVKVWEVGRGSCTPHGTLMGCNQSVTCV
RFDSTEKMILAASNDNACRIWGLHDQRLKHTLTGHTGKVLSAKFLGEDSS
KIVSGSHDRTLKIWDLRSKACTKTIFAGSSCNDLLTADVAGTTIISGHFD
KKIRFWDVRQDQNINEIQLQGRVTSLDLSQDMNFLLAVTRDDALKLIDMR
NNQIISTYRCEGFKVAFDYTRACFSPDAQFVMCGSYDGGVYVWNAKTNQL
EKVLREHKSAVVATAWHPNGTCMLSCDKNKHIVLWTDI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011308XLOC_011308Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020132TCONS_00020132Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR013923Autophagy-rel_prot_16
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..193
NoneNo IPR availableCOILSCoilCoilcoord: 270..318
NoneNo IPR availableGENE3D2.80.10.50coord: 615..686
e-value: 3.3E-18
score: 65.2
NoneNo IPR availableGENE3D1.20.5.1000coord: 107..256
e-value: 0.11
score: 12.0
coord: 267..355
e-value: 0.0044
score: 16.5
NoneNo IPR availableGENE3D1.10.10.670coord: 555..614
e-value: 1.4E-10
score: 40.4
NoneNo IPR availableCDDcd00200WD40coord: 399..685
e-value: 8.96475E-55
score: 189.083
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 544..558
score: 33.49
coord: 415..429
score: 32.12
coord: 502..516
score: 43.02
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 433..472
e-value: 1.9E-4
score: 30.8
coord: 475..515
e-value: 5.3E-9
score: 45.9
coord: 607..644
e-value: 0.69
score: 18.0
coord: 518..557
e-value: 2.5
score: 14.5
coord: 647..686
e-value: 4.5E-6
score: 36.2
coord: 388..428
e-value: 2.5E-7
score: 40.3
coord: 560..598
e-value: 4.9
score: 12.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 620..644
e-value: 0.0025
score: 18.5
coord: 398..427
e-value: 1.1E-4
score: 22.9
coord: 478..515
e-value: 9.4E-5
score: 23.0
coord: 442..471
e-value: 0.0098
score: 16.6
coord: 649..685
e-value: 0.003
score: 18.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 482..524
score: 14.285
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 396..437
score: 13.951
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 654..688
score: 9.874
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 541..566
score: 8.871
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 624..653
score: 9.874
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 440..481
score: 10.709
IPR013923Autophagy-related protein 16PFAMPF08614ATG16coord: 137..331
e-value: 1.4E-35
score: 123.3
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 509..554
e-value: 2.4E-11
score: 42.9
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 371..508
e-value: 4.4E-29
score: 101.2
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 544..558
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 502..516
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 396..688
score: 43.819
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 392..685

Blast
[Close]
BLAST of TCONS_00020132-protein vs. Swiss-Prot (Human)
Match: A16L1 (Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2)

HSP 1 Score: 427.172 bits (1097), Expect = 1.161e-141
Identity = 241/608 (39.64%), Postives = 357/608 (58.72%), Query Frame = 0 
Query:  127 AAELQGWRKNILQQLETRKAVEIRPFQELIESHNKLITAGSATKIRNQELEHQSYQLKQEIHELQGKVAVGNTGSPLSGNEKYLEQKIFKLQEEVTELHRNKGENAQKIIQLTAELKEKDEIISSKEAHILDAQNNQDAMAFESRKLQLTISELESTNQMLKDEHQALQMLHSSLETKINKLQEDNMQLVERWMQEKAKVADQINFENEMVASLRQKKLQQQLQDAANEPIQIK-----------------ATSYSKSPDRTGSFHLPVPAYVCITS-------------------------------VPDRARHTMDNAHDGEVSSLRFSISGKYFVSGGADRKVKVWEVGRGSCTPHGTLMGCNQSVTCVRFDSTEKMILAASNDNACRIWGLHDQRLKHTLTGHTGKVLSAKFLGEDSSKIVSGSHDRTLKIWDLRSKACTKTIFAGSSCNDLLTADVAGTTIISGHFDKKIRFWDVRQDQNINEIQLQGRVTSLDLSQDMNFLLAVTRDDALKLIDMRNNQIISTYRCEGFKVAFDYTRACFSPDAQFVMCGSYDGGVYVWNAKTNQLEKVL-REHKSAVVATAWHPNGTCMLSCDKNKHIVLW 685
            AA+   W+++I +QL  R  ++ + F+E+I  +NKL+       +  Q+L+ + + +    HE    ++ G+ G+      + + Q   K QEE+TELH+ +GE AQ +I L  +++ KD  +   EA I +       +  E   L+  + +LE  NQ LKDE+ ALQ+  ++LE K+ K  E+N +LV RWM EKA+ A+++N ENE  +  RQ +LQ++L +AA EP+ ++                  TS  ++  R  +  L  PA   + S                               VP  A    D AHDGEV++++FS   +   +GG DR+VK+WEV    C   G+L G N  +T + FDS    +LAASND A RIW + D RL+HTLTGH+GKVLSAKFL  D+++IVSGSHDRTLK+WDLRSK C KT+FAGSSCND++  +     ++SGHFDKKIRFWD+R +  + E++L G++T+LDL+ +   LL+ +RDD LK+ID+R N I  T+   GFK   D+TR  FSPD  +V  GS +G +Y+W+  T ++EKVL ++H S++ A AW P+G+ ++S DK    VLW
Sbjct:    7 AADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEKHDVPNR-HE----ISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRKDREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKLRKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFD-AHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFL-LDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTE---QCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLW 604
The following BLAST results are available for this feature:
BLAST of TCONS_00020132-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
A16L11.161e-14139.64Autophagy-related protein 16-1 OS=Homo sapiens GN=... [more]
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