TCONS_00020104-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020104-protein
Unique NameTCONS_00020104-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1236

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020104-protein ID=TCONS_00020104-protein|Name=TCONS_00020104-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1236bp
MNNKPRVGVKPNQILSSDIEVKIIGGKAVVTRIQKQGNQIVNKSQEHVPI
ETEEQQEVSKMASSAIEESQSEEVFSKYKCSSLPEDLDCIRHPGSIVEAG
ALAAQALPQSTYDLKASLPKEILKEGKLSDLQLEGILYACQRHQLILPDG
KRSGFFLADGTGVGKGRQIAGIILDNVCRKRTKHIWFSISSDLKHDAERD
LRDIGCYVKVIDGCQQLDQKTKTFGLSSEYKEGVVFSTYSTLVSSSQKDS
KKTCRLDQLIEWCGKDFDGCLIFDESHKAKHFMPGKEKSSTKVAVAVTNI
QRLLPKARVVYCSATGVTDVKNMAFMERLGLWGMGSTFTSFESFLDSLTK
RGLGALEMLSMEMKASGMYVSRGLSYHDAEFQTVETSLTDEQIKVYNKAV
DVWKELKRCLTVALGRTGSTNTRIWIQYWGCHQRFFKQLCMSMKIPEIAR
QSKEALENGYAVVIGLQTTGEASMDSELDQNEGNLSSFISLTREILRRFI
TQFFPTIVHVQGEEPRPDDWSVQAKTVLIGIVEKISLPNSPLDELIDQLG
GPSCIAEMTGRKGFIGRHDRKYKPQYIARASTASGNGGANHTATESINVK
ERNAFMNGKKFVAIISDAASTGISLHADIRAGNTRRRMHITAELPWSADK
AVQQLGRSHRSNQKSGPIYKLLTSNLGGERRFASAVARRLQSLGAITKGD
RRAATGADLTQFNFDTNYGRQALKTMYEAIVKGEMCLRISMAKVLHSCTG
GISGQLTTQNFHDVLKDCLVDMEILESKGVGFSVADRHAKDVGKFLNRIL
GLQVYKQNLIFSYFCQCLDATTELAKREGRYNDGVSDLKGNSIVIGEEPK
IVFKETDLGASITRHVKLLVDRGYPFEKACNILKANEGSDQTESGFYRSR
REQYGNKLYLLAIQKQRMQHLFTVTRPNTGMSQFEEDRNDLFSKYEKIEP
EQAEEGWTEQYNNTKEHCIHGETCKHKGSCFIGSRISEVHLITGRILSIL
PALELTVNKFAYALQLPRELRTLRVVRVELDNGQRLVGLRYPHSLISEAE
QYLTEQKRIGNAGTVFNPNASTEPITPVDKKARHKALSKPVTLHKFFGST
SILKQSSCSNTKDDTSNPNSSNSTDCDNKLSESNKHSKPSHKQSPELNNN
ENTPITGETETNKTPSRAVKRALSSTQTPPNKRPRKQENIFTMMSNKNLS
NSAQKKRKKNCPICQKDLEGLDNLKVNKHIDSCVIE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011300XLOC_011300Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020104TCONS_00020104Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026937SBNO_Helicase_C_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026937Strawberry notch, helicase C domainPFAMPF13871Helicase_C_4coord: 540..837
e-value: 2.7E-103
score: 345.1
NoneNo IPR availableGENE3D3.40.50.300coord: 432..699
e-value: 3.9E-10
score: 38.8
NoneNo IPR availablePFAMPF13872AAA_34coord: 91..398
e-value: 3.2E-125
score: 416.9
NoneNo IPR availableGENE3D3.40.50.300coord: 120..328
e-value: 1.5E-12
score: 46.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1104..1190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1064..1083
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 146..325
score: 10.849
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 596..705
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 118..340

Blast
BLAST of TCONS_00020104-protein vs. Swiss-Prot (Human)
Match: SBNO1 (Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 1.150e-111
Identity = 180/419 (42.96%), Postives = 263/419 (62.77%), Query Frame = 0
Query:   90 IRHPGSIVEAGALAAQALPQSTYDLKASLPKEILKEGKLSDLQLEGILYACQRHQLILPDGKRSGFFLADGTGVGKGRQIAGIILDNVCRKRTKHIWFSISSDLKHDAERDLRDIGCYVKVIDGCQQLDQKTKTFGLSSEYKEGVVFSTYSTLVSSSQKDSKKTCRLDQLIEWCGKDFDGCLIFDESHKAKHFMPGKEKSSTKVAVAVTNIQRLLPKARVVYCSATGVTDVKNMAFMERLGLWGMGSTFTSFESFLDSLTKRGLGALEMLSMEMKASGMYVSRGLSYHDAEFQTVETSLTDEQIKVYNKAVDVW---KELKRCLTVALGRTGSTNTRIWIQYWGCHQRFFKQLCMSMKIPEIARQSKEALENGYAVVIGLQTTGEASMDSELDQNEGNLSSFISLTREILRRFITQFFP 505
            +RHP ++VE  +L++   P   Y  K S+ +E +  G LS LQLE I YA Q+H+  LP+G R+GF + DG GVGKGR IAGII +N    R + +WFS+S+DLK+DAERDLRDIG    ++    +      +   +   K+GV+F+TYS+L+  SQ   K   RL QL+ WCG DFDG ++FDE HKAK+  P      TK  +AV  +Q  LPKARVVY SATG ++ +NMA+M RLG+WG G+ F  F  F+ ++ +RG+GA+E+++M+MK  GMY++R LS+    F+  E  L+   +K+YNKAV +W   +E  +     +         +W Q+W  HQRFFK LC++ K+  + + ++E ++NG  VVIGLQ+TGEA     L++  G L+ F+S  + +L+  I + FP
Sbjct:  254 LRHPDAVVETSSLSSVTPPDVWY--KTSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFP 670          

HSP 2 Score: 325.479 bits (833), Expect = 2.670e-92
Identity = 212/560 (37.86%), Postives = 309/560 (55.18%), Query Frame = 0
Query:  523 QAKTVLIGIVEKIS--LPNSPLDELIDQLGGPSCIAEMTGRKGFIGRHDRKYKPQYIARASTASGNGGANHTATESINVKERNAFMNGKKFVAIISDAASTGISLHADIRAGNTRRRMHITAELPWSADKAVQQLGRSHRSNQKSGPIYKLLTSNLGGERRFASAVARRLQSLGAITKGDRRAATGADLTQFNFDTNYGRQALKTMYEAIVKGEMCLRISMAKVLHSCTGGISGQLTTQNFHDVLKDCL-VDMEILESKGVGFSVADRHAKDVGKFLNRILGLQVYKQNLIFSYFCQCLDATTELAKREGRYNDGVSDL-KGNSIVIGEEPKIVFKETDLGASITRHVKLL---VDRGYPFEKACNILKANEGSDQTESGFYRSRREQYGNKLYLLAIQKQRMQHLFTVTRPNTGMSQFEEDRNDLFSKYEKIEPEQAEEGWTEQYNNTKEHCIHGE---TCKHKG---SCFIGSRISEVHLITGRILSILPALELTVNKFAYALQLPRELRTLRVVRVELDNGQRLVGLRYPHSLIS----------EAEQYLTEQKRI 1059
            Q K  L+  +EK++  LP + LDELID+LGGP  +AEMTGRKG +  +D      Y +R+              E +N+ E+  FM+G K +AIIS+AAS+GISL AD RA N RRR+H+T ELPWSAD+A+QQ GR+HRSNQ + P Y  L S L GE+RFAS VA+RL+SLGA+T GDRRA    DL++FNFD  YGR AL+ + ++IV        ++   + S      G+     F DV +  + V +  +E +  G    D+   ++GKFLNRILG++V++QN +F YF   L A  + AK+ GRY+ G+ DL  G+  V   + K   K    G S + HV+L    V+RG  +E+A  I     G D    GFY S + +   K  +L  +    + LF V RPNTG     E   DL  KY+K+  + A   W +QYN++ + C H      CK       C IG R    +++ G +LS+   +E  +   +           +++VR+  ++GQR+VGL  P + +S          +++Q   +QK++
Sbjct:  853 QMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDG-SISYESRSEL--------DVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIVMKSIV--------NLDSPMVSPPPDYPGEF----FKDVRQGLIGVGLINVEDRS-GILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVK---KFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGPD---DGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSDDALMHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGTNV------KMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQL 1378          
The following BLAST results are available for this feature:
BLAST of TCONS_00020104-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SBNO11.150e-11142.96Protein strawberry notch homolog 1 OS=Homo sapiens... [more]
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