|
Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00020104-protein ID=TCONS_00020104-protein|Name=TCONS_00020104-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1236bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00020104-protein vs. Swiss-Prot (Human)
Match: SBNO1 (Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 1.150e-111 Identity = 180/419 (42.96%), Postives = 263/419 (62.77%), Query Frame = 0
Query: 90 IRHPGSIVEAGALAAQALPQSTYDLKASLPKEILKEGKLSDLQLEGILYACQRHQLILPDGKRSGFFLADGTGVGKGRQIAGIILDNVCRKRTKHIWFSISSDLKHDAERDLRDIGCYVKVIDGCQQLDQKTKTFGLSSEYKEGVVFSTYSTLVSSSQKDSKKTCRLDQLIEWCGKDFDGCLIFDESHKAKHFMPGKEKSSTKVAVAVTNIQRLLPKARVVYCSATGVTDVKNMAFMERLGLWGMGSTFTSFESFLDSLTKRGLGALEMLSMEMKASGMYVSRGLSYHDAEFQTVETSLTDEQIKVYNKAVDVW---KELKRCLTVALGRTGSTNTRIWIQYWGCHQRFFKQLCMSMKIPEIARQSKEALENGYAVVIGLQTTGEASMDSELDQNEGNLSSFISLTREILRRFITQFFP 505
+RHP ++VE +L++ P Y K S+ +E + G LS LQLE I YA Q+H+ LP+G R+GF + DG GVGKGR IAGII +N R + +WFS+S+DLK+DAERDLRDIG ++ + + + K+GV+F+TYS+L+ SQ K RL QL+ WCG DFDG ++FDE HKAK+ P TK +AV +Q LPKARVVY SATG ++ +NMA+M RLG+WG G+ F F F+ ++ +RG+GA+E+++M+MK GMY++R LS+ F+ E L+ +K+YNKAV +W +E + + +W Q+W HQRFFK LC++ K+ + + ++E ++NG VVIGLQ+TGEA L++ G L+ F+S + +L+ I + FP
Sbjct: 254 LRHPDAVVETSSLSSVTPPDVWY--KTSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFP 670 HSP 2 Score: 325.479 bits (833), Expect = 2.670e-92 Identity = 212/560 (37.86%), Postives = 309/560 (55.18%), Query Frame = 0
Query: 523 QAKTVLIGIVEKIS--LPNSPLDELIDQLGGPSCIAEMTGRKGFIGRHDRKYKPQYIARASTASGNGGANHTATESINVKERNAFMNGKKFVAIISDAASTGISLHADIRAGNTRRRMHITAELPWSADKAVQQLGRSHRSNQKSGPIYKLLTSNLGGERRFASAVARRLQSLGAITKGDRRAATGADLTQFNFDTNYGRQALKTMYEAIVKGEMCLRISMAKVLHSCTGGISGQLTTQNFHDVLKDCL-VDMEILESKGVGFSVADRHAKDVGKFLNRILGLQVYKQNLIFSYFCQCLDATTELAKREGRYNDGVSDL-KGNSIVIGEEPKIVFKETDLGASITRHVKLL---VDRGYPFEKACNILKANEGSDQTESGFYRSRREQYGNKLYLLAIQKQRMQHLFTVTRPNTGMSQFEEDRNDLFSKYEKIEPEQAEEGWTEQYNNTKEHCIHGE---TCKHKG---SCFIGSRISEVHLITGRILSILPALELTVNKFAYALQLPRELRTLRVVRVELDNGQRLVGLRYPHSLIS----------EAEQYLTEQKRI 1059
Q K L+ +EK++ LP + LDELID+LGGP +AEMTGRKG + +D Y +R+ E +N+ E+ FM+G K +AIIS+AAS+GISL AD RA N RRR+H+T ELPWSAD+A+QQ GR+HRSNQ + P Y L S L GE+RFAS VA+RL+SLGA+T GDRRA DL++FNFD YGR AL+ + ++IV ++ + S G+ F DV + + V + +E + G D+ ++GKFLNRILG++V++QN +F YF L A + AK+ GRY+ G+ DL G+ V + K K G S + HV+L V+RG +E+A I G D GFY S + + K +L + + LF V RPNTG E DL KY+K+ + A W +QYN++ + C H CK C IG R +++ G +LS+ +E + + +++VR+ ++GQR+VGL P + +S +++Q +QK++
Sbjct: 853 QMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDG-SISYESRSEL--------DVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIVMKSIV--------NLDSPMVSPPPDYPGEF----FKDVRQGLIGVGLINVEDRS-GILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVK---KFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGPD---DGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSDDALMHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGTNV------KMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQL 1378 The following BLAST results are available for this feature:
BLAST of TCONS_00020104-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|
