TCONS_00020088-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020088-protein
Unique Name	TCONS_00020088-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	594

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020088-protein ID=TCONS_00020088-protein|Name=TCONS_00020088-protein|organism=Clytia hemisphaerica|type=polypeptide|length=594bp
MDLLQIFMIFVLFEVCSCLQVSSSHHTLSASRAVLRKLKTLHPGKSFHLK
RKTKEHHTITNNQWNKIDNSTIRENIRKETEKSYSLRSTSYAYVMQLDLG
TPKQNLEFLIDTGSANMAIAGPECQDKDGVKCQIDTFYDPKKSTTSVYIG
HPVEVEYGKGSWSGEVYRDVVAFPNEGPQIVADFAVIKQEKEFFLKNSVN
EGILGLAYKTLSTSHVEPIFDQLVDEKKAEDVFTLSFCNGNGRFWLDYPL
ENEYISPIQWTRIIHRAWYTARMTGIDVAGHSLGLSPYSYPPAIIDSGTT
DILLEPEIYIAVIAMLRKHGPRVDERFWNNYCVHTDPYKWPYITIYLKNM
KGGSFALTILGKHYVRKQDQFHCLSIGAKQYGTVLGEVTLEGNVVIFDRE
KHRVGFAPSNLTDPDTGEPCGNPVAINTTVSGALKDFCEAPYMPYASCFT
TCQTCIDHAGAWCPHGRVFVWINGVRSELDAGDGYCWTGNFFTFDSINFQ
TYLKGHGSVEFEFECFSMLPMYKQCLIHGEWLFAIFIVIVIVLTIMCACM
CCRKVYEVDSRPSQERYPLINRPGDKEPLPVPSAPKYYRLSNSR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011292	XLOC_011292	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020088	TCONS_00020088	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001461	Aspartic_peptidase_A1
IPR033121	PEPTIDASE_A1
IPR021109	Peptidase_aspartic_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004190	aspartic-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001461	Aspartic peptidase A1 family	PRINTS	PR00792	PEPSIN	coord: 383..398 score: 31.45 coord: 99..119 score: 41.1 coord: 293..304 score: 46.28
IPR033121	Peptidase family A1 domain	PFAM	PF00026	Asp	coord: 93..408 e-value: 5.9E-40 score: 137.5
IPR033121	Peptidase family A1 domain	PROSITE	PS51767	PEPTIDASE_A1	coord: 93..407 score: 38.5
IPR021109	Aspartic peptidase domain	GENE3D	2.40.70.10		coord: 43..246 e-value: 2.1E-35 score: 122.1
IPR021109	Aspartic peptidase domain	GENE3D	2.40.70.10		coord: 249..420 e-value: 1.5E-27 score: 95.7
IPR021109	Aspartic peptidase domain	SUPERFAMILY	50630	Acid proteases	coord: 88..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 567..594

Blast

[Close]

BLAST of TCONS_00020088-protein vs. Swiss-Prot (Human)
Match: BACE2 (Beta-secretase 2 OS=Homo sapiens GN=BACE2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.909e-39
Identity = 111/348 (31.90%), Postives = 167/348 (47.99%), Query Frame = 0

Query:   92 AYVMQLDLGTPKQNLEFLIDTGSANMAIAGPECQDKDGVKCQIDTFYDPKKSTTSVYIGHPVEVEYGKGSWSGEVYRDVVAFPNE-GPQIVADFAVIKQEKEFFLKNSVNEGILGLAYKTLS--TSHVEPIFDQLVDEKKAEDVFTLSFCNG----------NGRFWLDYPLENEYISPIQWTRIIHRAWYTARMTGIDVAGHSLGLS--PYSYPPAIIDSGTTDILLEPEIYIAVIAMLRKHG--PRVDERFWNN---YCVHTDPYKW---PYITIYLKNMKGG-SFALTILGKHYVRKQD----QFHC--LSIGAKQYGTVLGEVTLEGNVVIFDREKHRVGFAPS 409
             Y +++ +GTP Q L+ L+DTGS+N A+AG            IDT++D ++S+T    G  V V+Y +GSW+G V  D+V  P       + + A I + + FFL      GILGLAY TL+  +S +E  FD LV +    +VF++  C             G   L     + Y   I +T I    +Y   +  +++ G SL L    Y+   AI+DSGTT + L  +++ AV+  + +    P   + FW      C       W   P I+IYL++     SF +TIL + Y++        + C    I       V+G   +EG  VIFDR + RVGFA S
Sbjct:   91 GYYLEMLIGTPPQKLQILVDTGSSNFAVAGTP-------HSYIDTYFDTERSSTYRSKGFDVTVKYTQGSWTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAAS 431

The following BLAST results are available for this feature:

BLAST of TCONS_00020088-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020088-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BACE2	3.909e-39	31.90	Beta-secretase 2 OS=Homo sapiens GN=BACE2 PE=1 SV=...	[more]

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TCONS_00020088-protein (polypeptide) - C. hemisphaerica