TCONS_00020068-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020068-protein
Unique Name	TCONS_00020068-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	482

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020068-protein ID=TCONS_00020068-protein|Name=TCONS_00020068-protein|organism=Clytia hemisphaerica|type=polypeptide|length=482bp
MTSNDLFCINDYDCIGFDMDHTMVQYKLPNTFRLQYQCVVDFLVNEKSYC
PKTFNMENYEKFEDFSQRGIIFDIVKGNFVKLDKNGVVVSCTHGMRECDA
EETMSYYGEDRVWPLFQTLKEKVYNAEGYWIIENFFLMPVCSIMGQMVEE
ADKRNDGKHLSTYKPLYVHMIEALALSFDNKSFRKDIGGFFPAFKRNQEK
YIKKIPQSVVDWIRSLRKAGKVVALITDSYTDFASHLMEYALGPDWTNDF
DFIVTHANKPNFFTPSYKDRCFVNNDANGDESTEVKDTLKPHTIYSLGNA
WKFEETLKAYTGKDEVKVVYFGDSMKSDVFPPKHLKGWDTVAVLEELEAE
EVHFHKNNQSIYHQAKRPKIKPLLKEEKLLIASSQWGSFFTHPQSSHQDG
TTSNGKQNGSTSNDEVHEINTFWGDIIRRYSDLAIPLLDYLAETSVTEKF
PKFTDSQFGFFPSAPRSILKDHCLDEKNGKNE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011281	XLOC_011281	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020068	TCONS_00020068	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023214	HAD-like_dom
IPR008380	HAD-SF_hydro_IG_5-nucl

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023214	HAD-like domain	GENE3D	3.40.50.1000		coord: 8..421 e-value: 4.6E-12 score: 45.6
IPR023214	HAD-like domain	SUPERFAMILY	56784	HAD-like	coord: 4..367
IPR008380	HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase	PFAM	PF05761	5_nucleotid	coord: 12..431 e-value: 7.6E-61 score: 206.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..413

Blast

[Close]

BLAST of TCONS_00020068-protein vs. Swiss-Prot (Human)
Match: NT5D1 (5'-nucleotidase domain-containing protein 1 OS=Homo sapiens GN=NT5DC1 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 2.252e-76
Identity = 158/481 (32.85%), Postives = 243/481 (50.52%), Query Frame = 0

Query:    7 FCINDYDCIGFDMDHTMVQYKLPNTFRLQYQCVVDFLVNEKSYCPKTFNM--ENYEKFEDFSQRGIIFDIVKGNFVKLDKNGVVVSCTHGMRECDAEETMSYYGEDRVWPLFQTLKEKVYNAEGYWIIENFFLMPVCSIMGQMVEEADKRNDGKHLSTYKPLYVHMIEALALSFDNKSFRKDIGGFFPAFKRNQEKYIKKIPQSVVDWIRSLRKAGKVVALITDSYTDFASHLMEYALGPDWTNDFDFIVTHANKPNFFTPSYKDRCFVNNDANGDESTEVKDTLKPHTIYSLGNAWKFEETLKAYTGKDEVKVVYFGDSMKSDVFPPKHLKGWDTVAVLEELEAEEVHFHKNNQSIYHQAKR-----PKIKPLLKEEKLLIASSQWGSFFTHPQSSHQDGTTSNGKQNGSTSNDEVHEINTFWGDIIRRYSDLAIPLLDYLAETSVTEKFPKFTDSQ---FGFFPSAPRSILKDHCLDEK 477
            F +   D +GFD+DHT+ +Y LP +  L Y     FLV EK Y  +  N+  E++    DF  +G+  D+  GNF+KL  NG V+  +HG +    E     YG+ + W  F +       +  Y+  +N+F +P   +  ++V+   K N+G+    +   +  ++ A+  ++   +F+++ G +FP  KR+  +Y+   P+SV  W+R L+ AGK++ LIT S++D+   L EY LG D+T+ FD ++T+A KP FF+     R F       DE  E   +L     YS GNA    E LK  TGK E KVVYFGDSM SD+FP +H   W+TV +LEEL  +E    +  +      K+     PK KP      L  +S +WGSFF       +              N E   + T+    I  YS +AIP ++ +AE  +  KF +F+ S     G++P+ P  +  D  L  K
Sbjct:    5 FSLAACDVVGFDLDHTLCRYNLPESAPLIYNSFAQFLVKEKGYDKELLNVTPEDW----DFCCKGLALDLEDGNFLKLANNGTVLRASHGTKMMTPEVLAEAYGK-KEWKHFLSDTGMACRSGKYYFYDNYFDLPGALLCARVVDYLTKLNNGQKTFDF---WKDIVAAIQHNYKMSAFKENCGIYFPEIKRDPGRYLHSCPESVKKWLRQLKNAGKILLLITSSHSDYCRLLCEYILGNDFTDLFDIVITNALKPGFFSHLPSQRPF--RTLENDEEQEALPSLDKPGWYSQGNAVHLYELLKKMTGKPEPKVVYFGDSMHSDIFPARHYSNWETVLILEELRGDEGTRSQRPEESEPLEKKGKYEGPKAKP------LNTSSKKWGSFFIDSVLGLE--------------NTEDSLVYTWSCKRISTYSTIAIPSIEAIAELPLDYKFTRFSSSNSKTAGYYPNPPLVLSSDETLISK 455

The following BLAST results are available for this feature:

BLAST of TCONS_00020068-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020068-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NT5D1	2.252e-76	32.85	5'-nucleotidase domain-containing protein 1 OS=Hom...	[more]

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TCONS_00020068-protein (polypeptide) - C. hemisphaerica