TCONS_00020059-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020059-protein
Unique Name	TCONS_00020059-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	558

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020059-protein ID=TCONS_00020059-protein|Name=TCONS_00020059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
MGPEEDPISIFLVISGSRGQRMLFRYPFQETSVSYGKSINSPQRIKSISE
DIFQNPYRLNTQSSSNQESTKNQSVLNGGSIYGFSDSELASLMAPKSILC
DQKFELKIGHVKLIGYPVQVRTDGTCSGFQDLLELESLDNDVMINMVNVV
MAIHANVDATVASHYQNICMMLGKALRHEEKRVRYLSNQHEIMVLEIDRI
EDLPESEQNVHERTLAKSQLAKDIVSAFQSMCDYGIVNINVNGWLGLNYC
FPHKIHKAEIRETMIDTSKFNTYIRRIKPYHTLLLTDDDDNEHEENEIAN
LIKILPPDASPVLHRLITLSRPVKNFQTLCQDADISLPQIFQIVAHLIYW
GKCIVIYPLAESNIYVLAESVPTEIDSKCSEEFTKKFPEQSLHNVFQKFS
FPLTLGDYRNPLCNDKHVEHAQIVTWLLKKRLIKQLHTFVYMVPMAAIDL
ERDNEIDPVEQRNTFFQRFQLKGTGDKTIFDAFPVAMQLSIISVSYLVER
DDMLFFLRMTKYFDGEHHLENIMYFENVSRSKLIICIDKFRSILITVQHQ
DAATVQLA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011275	XLOC_011275	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020059	TCONS_00020059	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005365	NPR3

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005365	Nitrogen permease regulator 3	PFAM	PF03666	NPR3	coord: 83..125 e-value: 2.4E-7 score: 29.9 coord: 143..443 e-value: 2.7E-30 score: 105.5

Blast

[Close]

BLAST of TCONS_00020059-protein vs. Swiss-Prot (Human)
Match: NPRL3 (GATOR complex protein NPRL3 OS=Homo sapiens GN=NPRL3 PE=1 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 2.528e-106
Identity = 197/587 (33.56%), Postives = 312/587 (53.15%), Query Frame = 0

Query:    7 PISIFLVISGSRGQRMLFRYPFQETSVSYGKSINSPQRIKSISEDIFQNPYRLNTQSSSNQESTKNQSVLNGGSIYGFSDSELASLMAPKSILCDQKFELKIGHVKLIGYPVQVR-TDGTCSGFQDLLELESLDNDVMINMVNVVMAIHANVDATVASHYQNICMMLGKALRHEEKRVRYLSNQHEIMVL---EIDRIEDLPESEQNVHERTLAKSQLAKDIVSAFQSMCDYGIVNINVNGWLGLNYCFPHKIHKAEIRETMIDTSKFNTYIRRIKPYHTLLLTDDDDNEHEENEIANLIKILPPDASPVLHRLITLSRPVKNFQTLCQDADISLPQIFQIVAHLIYWGKCIVIYPLAESNIYVLAESVPTEIDSKCSEEFTKKFPEQSLHNVFQKFSFPLTLGDYRNPLCND-KHVEHAQIVTWLLKKRLIKQLHTFVYMVPMAAIDLERDNEID-PVEQR---------NTFF-------------------QRFQLKGTGD--------KTIFDAFPVAMQLSIISVSYLVERDDMLFFLRMTKYFDGEHHLENIMYFENVSRSKLIICIDKFRSILITVQHQD 551
            PIS+ LV SGSRG ++LFRYPFQ +        + P+   + S          NT   ++++   ++          FSD  LA+++A KS +C QKFELKI +V+ +G+P  ++   G  S      + E+     MI + NVV A+ AN D +V +   N+   +   L+HEE+R +YL+ + ++++    E+  + D  E  Q+     L K +LA+D+  A+ S+C  G+V +++N WL +++C PHKIH A    ++I        ++ I+PYH LLL  D+ +         L+  LP D SP L R+I  +  VKN Q L QDAD++L Q+FQ+ AHL+YWGK I+IYPL E+N+Y+L+ +    + S  +E+F+ +FP   L +V  KFS P++L ++RNPL    +  +  Q+V W+L++RL+ QLHT+V ++   + +  R  E D P   R         N                         +L  +GD        + +  +     + +I+SV      +D+  F R+  YF G HHLE IMY EN  RS+L++  DKFRS+L+   H+D
Sbjct:    7 PISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAAS----------NTGDHADEQDGDSR----------FSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQISKTDPSPKREA---PTMI-LFNVVFALRANADPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA--SSLIPPEAIERSLKAIRPYHALLLLSDEKS---------LLGELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHED 558

The following BLAST results are available for this feature:

BLAST of TCONS_00020059-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020059-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NPRL3	2.528e-106	33.56	GATOR complex protein NPRL3 OS=Homo sapiens GN=NPR...	[more]

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TCONS_00020059-protein (polypeptide) - C. hemisphaerica