TCONS_00020044-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020044-protein
Unique NameTCONS_00020044-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length349

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020044-protein ID=TCONS_00020044-protein|Name=TCONS_00020044-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
MPIVGTCTEMCPHEEHVMRSRTKRLHFIERHSQQSVKEYARCAAGSTRSP
KELRTPDALVKTTHFLVSLLNFEHHDNNLLATTNFITDRLRAVRQDIIIQ
QLPPHFGISIIQQIVRYHILVQYLLHQQPPTSFDPVLNDQLLRSYLSDLM
EYYQLLPIEENLKHQVDEFKSYQLLLNIHDQAFIQRLLIDFFEESSSVLR
LKEPSCRFQTVFSLYLSWSSGNFYRFFKKCHGLSFLESCCLLEHFTTIRV
HFLDVLSAGFQSKHFKFNLEKMQDWFCFDNEKDLYEFLKHFNLPFDENNK
QVNFQQKKTFQLESRSDRFDLIRKCTYIKLIENSRELESKNYTQVILPT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011266XLOC_011266Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020044TCONS_00020044Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005062SAC3/GANP/THP3
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005062SAC3/GANP/THP3PFAMPF03399SAC3_GANPcoord: 5..296
e-value: 7.6E-66
score: 222.4

Blast
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BLAST of TCONS_00020044-protein vs. Swiss-Prot (Human)
Match: GANP (Germinal-center associated nuclear protein OS=Homo sapiens GN=MCM3AP PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 3.247e-23
Identity = 76/262 (29.01%), Postives = 123/262 (46.95%), Query Frame = 0 
Query:    4 VGTCTEMCPHEEHVMRSRTKRLHFIE--------RHSQQSVKEYARCAAGSTRS-PKELRTPDALVKTTHFLVSLLNFEHHDNNLLATTNFITDRLRAVRQDIIIQQLPPHFGISIIQQIVRYHILVQYLLHQQPPTSFDPVLNDQLLRSYLSDLMEYYQLLPIEENLKHQVDEFKSYQLLLNIHDQAFIQRLLIDFFEESSSVLRLKEPSCRFQTVFSLYLSWSSGNFYRFFKKCHGLSFLESCCLLEHFTTIRVHFLDVL 256
            VGTC +MCP +E  MR    +L   E         H+  +VKEY+R +A      P ELR    L +T  +LV+ +  +  + +L    +F+ +R R +R+DI  Q L     +S+I++  R+HI   + + ++P +SFD  +N++ +   L  L E YQ L  +        EF+ Y +LL+++          D   E          S   +     + + +S NF RFFK     S+L +C L  +F+ IR   L  L
Sbjct:  634 VGTCLDMCPEKERYMRETRSQLSVFEVVPGTDQVDHAA-AVKEYSRSSADQEEPLPHELRPLPVLSRTMDYLVTQI-MDQKEGSLRDWYDFVWNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENMTKCLQSLKEMYQDLRNKGVFCASEAEFQGYNVLLSLNKG--------DILREVQQFHPAVRNSSEVKFAVQAFAALNSNNFVRFFKLVQSASYLNACLLHCYFSQIRKDALRAL 885
The following BLAST results are available for this feature:
BLAST of TCONS_00020044-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GANP3.247e-2329.01Germinal-center associated nuclear protein OS=Homo... [more]
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