TCONS_00019969-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019969-protein
Unique NameTCONS_00019969-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length519

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019969-protein ID=TCONS_00019969-protein|Name=TCONS_00019969-protein|organism=Clytia hemisphaerica|type=polypeptide|length=519bp
MDSDDDFMYDEDELSDPEDDQDDFDISCDVEAAGETSSSSFKYNKDEDDF
SYVCLTPESIVVTMNQCIEEVNSVFQIPHSTARILLTHFKWDKEKLLERY
YTTDQEKLFAEAHVINPHRNRPMTTRSKTAAAIVGSSKNIFPECGICLSE
VQLDILTGLQCGHKFCQFCWNEYLISKILHENTGQDIFCPASQCDILVDE
NFVIKILQDSSVRSRYHKLIADSFVQSNHLMKWCPAPDCSNAIKACYNDA
KPVECLCGYTFCFSCGHQSHDPVKCFWLKKWMKKCDDDSETSNWISANTK
ECPKCHVTIEKNGGCNHMICRNTACKGDFCWVCLGPWQSHGSSWYNCNRY
DEKDAQQARDAQTKSRAALERYLFYCNRYMNHLQSAKFEQKLYNQVKEKM
DTMQEMNMSWIEVQFLKKAVDILCLCRNTLKFTYVFAFYLKKNNHSIIFE
DNQSDLEMATEHLSEFLERDLNSNGLAGVQEIKQKVQDKYRYCEQRRNVL
LEHVHEGYEKDFWEYQEDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011216XLOC_011216Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019969TCONS_00019969Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002867IBR_dom
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002867IBR domainSMARTSM00647ibrneu5coord: 214..275
e-value: 3.8E-19
score: 79.6
coord: 283..347
e-value: 2.8E-9
score: 46.8
IPR002867IBR domainPFAMPF01485IBRcoord: 215..275
e-value: 2.6E-12
score: 46.7
coord: 294..341
e-value: 3.1E-6
score: 27.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 234..305
e-value: 4.5
score: 5.7
coord: 144..192
e-value: 0.1
score: 19.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 144..193
score: 9.937
NoneNo IPR availableGENE3D2.20.25.20coord: 233..277
e-value: 7.7E-7
score: 28.9
coord: 301..351
e-value: 2.1E-10
score: 40.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 215..282
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 142..223
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 294..352
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 124..213
e-value: 2.1E-7
score: 29.8

Blast
[Close]
BLAST of TCONS_00019969-protein vs. Swiss-Prot (Human)
Match: ARI1 (E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1 SV=2)

HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0
Identity = 312/478 (65.27%), Postives = 366/478 (76.57%), Query Frame = 0 
Query:   44 NKDEDDFSYVCLTPESIVVTMNQCIEEVNSVFQIPHSTARILLTHFKWDKEKLLERYYTTDQEKLFAEAHVINPH---RNRPMTTRSKTAAAIVGSSKNIFPECGICLSEVQLDILTGLQCGHKFCQFCWNEYLISKILHENTGQDIFCPASQCDILVDENFVIKILQDSSVRSRYHKLIADSFVQSNHLMKWCPAPDCSNAIKACYNDAKPVECLCGYTFCFSCGHQSHDPVKCFWLKKWMKKCDDDSETSNWISANTKECPKCHVTIEKNGGCNHMICRNTACKGDFCWVCLGPWQSHGSSWYNCNRYDEKDAQQARDAQTKSRAALERYLFYCNRYMNHLQSAKFEQKLYNQVKEKMDTMQEMNMSWIEVQFLKKAVDILCLCRNTLKFTYVFAFYLKKNNHSIIFEDNQSDLEMATEHLSEFLERDLNSNGLAGVQEIKQKVQDKYRYCEQRRNVLLEHVHEGYEKDFWEYQED 518
            ++ E+D+ Y  LT E I+  M +CI EVN V Q P +  RILL+HF WDKEKL+ERY+  + EKLFAE HVINP    R R M TRS         S    P C IC         TGL+CGHKFC  CW+EYL +KI+ E  GQ I CPA  CDILVD+N V++++ DS V+ +Y  LI +SFV+ N L+KWCPAPDC + +K  Y DAKPV C CG  FCF+CG   HDPVKC WLKKW+KKCDDDSETSNWI+ANTKECPKCHVTIEK+GGCNHM+CRN  CK +FCWVCLGPW+ HGS+WYNCNRY+E DA+ ARDAQ +SRAAL+RYLFYCNRYMNH+QS +FE KLY QVK+KM+ MQ+ NMSWIEVQFLKKAVD+LC CR TL +TYVFAFYLKKNN SIIFE+NQ+DLE ATE LS +LERD++ + L   Q+IKQKVQDKYRYCE RR VLL+HVHEGYEKD WEY ED
Sbjct:   93 HEQEEDYRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRS---------SAQDMP-CQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSL---QDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED 557
The following BLAST results are available for this feature:
BLAST of TCONS_00019969-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARI10.000e+065.27E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens ... [more]
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