TCONS_00019800-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00019800-protein
Unique Name	TCONS_00019800-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	475

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00019800-protein ID=TCONS_00019800-protein|Name=TCONS_00019800-protein|organism=Clytia hemisphaerica|type=polypeptide|length=475bp
MSHDEDGLPLLIHVRENNDKLFTAFLASVIASLASLNFGYALGYSSPTQK
QMSPDPLDKDQFSWFSSIVALGAIVGSWIGAYMVDKLGRKMSIMLSAFFY
VPGWCLIAYGESVGMLYVGRIISGMGVGISALSVPMYISEIASSRYRGGL
SCINQLFITFGDVVVYSIGAIHAVKWQWLAIIPVIIATIAILLMSFMPET
PVWLLANHKKGEALRTLVWLRGSSYDCASELNDLQLNLETQEKISLRAFL
SPVLYRPLIIGCMMMVFQQMVGINAILFFCDKVFTQAGISWDEYASIAAI
CVLFAFTVVSCLTVDRLGRRILLLVGSVVMFVCMFLLGVYYDLAENPKNT
LRIFGHKSHTIPVSHISWLALLSVFLYLALFAIGWGPLPWVLMGELFPPR
ARSQASSMVTMVNLIFTFIVGKTFASFTDVFQPQGTFWFYSGFCILSFLY
TMFFVPETKGKTLMEIERIFATSTQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011135	XLOC_011135	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00019800	TCONS_00019800	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003663	Sugar/inositol_transpt
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022891	substrate-specific transmembrane transporter activity
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0022891	substrate-specific transmembrane transporter activity
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003663	Sugar/inositol transporter	PRINTS	PR00171	SUGRTRNSPORT	coord: 117..136 score: 42.04 coord: 35..45 score: 37.95 coord: 394..406 score: 37.95 coord: 268..278 score: 50.53 coord: 371..392 score: 34.81
IPR003663	Sugar/inositol transporter	TIGRFAM	TIGR00879	TIGR00879	coord: 10..466 e-value: 6.3E-97 score: 323.2
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 29..470 e-value: 1.3E-101 score: 340.7
None	No IPR available	GENE3D	1.20.1250.20		coord: 18..214 e-value: 2.1E-30 score: 105.0
None	No IPR available	GENE3D	1.20.1250.20		coord: 235..475 e-value: 3.6E-39 score: 133.8
IPR005829	Sugar transporter, conserved site	PROSITE	PS00217	SUGAR_TRANSPORT_2	coord: 122..147
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 80..97
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 27..459 score: 40.238
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 29..455 e-value: 3.77517E-22 score: 95.0732
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 29..212 coord: 241..467

Blast

[Close]

BLAST of TCONS_00019800-protein vs. Swiss-Prot (Human)
Match: GTR8 (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=1 SV=3)

HSP 1 Score: 284.648 bits (727), Expect = 5.434e-91
Identity = 173/449 (38.53%), Postives = 264/449 (58.80%), Query Frame = 0

Query:   36 LNFGYALGYSSPT----QKQMSPDP-LDKDQFSWFSSIVALGAIVGSWIGAYMVDKLGRKMSIMLSAFFYVPGWCLIAYGESVGMLYVGRIISGMGVGISALSVPMYISEIASSRYRGGLSCINQLFITFGDVVVYSIGAIHAVKWQWLAIIPVIIATIAILLMSFMPETPVWLLANHKKGEALRTLVWLRGSSYDCASELNDLQLNLETQEKISLRAFLSPVLYRPLIIGCMMMVFQQMVGINAILFFCDKVFTQAGISWDEYASIAAICVLFAFTVVSCLTVDRLGRRILLLVGSVVMFVCMFLLGVYYDLAEN-PKNTLRIFGHKSHTIPVSH--------ISWLALLSVFLYLALFAIGWGPLPWVLMGELFPPRARSQASSMVTMVNLIFTFIVGKTFASFTDVFQPQGTFWFYSGFCILSFLYTMFFVPETKGKTLMEIERIF 470
            L+FG+ALGYSSP     Q+   P P LD    SWF ++V LGA  G  +G ++VD+ GRK+S++L +  +V G+ +I   + V ML  GR+++G+  G+++L  P+YISEIA    RG L    QL +  G ++ Y  G +  ++W+WLA++  +  ++ +LLM FMPETP +LL  H++ EA+  L +L GS         D  +  E    ++L     P +Y+P IIG  +M FQQ+ G+NA++F+ + +F +A       AS+    +   FT V+ L +DR GRR+LL++  VVM       G Y+ L +  P N+     H + + PVS         ++WLA+ S+ L++A FA+GWGP+PW+LM E+FP   +  A+ +  + N +  F+V K F+S  +V +P G FW  S FCI S L+T+F VPETKGKTL +I   F
Sbjct:   38 LSFGFALGYSSPAIPSLQRAAPPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVPFVAGFAVITAAQDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILLAYLAGWV--LEWRWLAVLGCVPPSLMLLLMCFMPETPRFLLTQHRRQEAMAALRFLWGSEQG----WEDPPIGAEQSFHLAL--LRQPGIYKPFIIGVSLMAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNS----SHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQITAHF 474

The following BLAST results are available for this feature:

BLAST of TCONS_00019800-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00019800-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GTR8	5.434e-91	38.53	Solute carrier family 2, facilitated glucose trans...	[more]

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TCONS_00019800-protein (polypeptide) - C. hemisphaerica