TCONS_00019798-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00019798-protein
Unique Name	TCONS_00019798-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	517

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00019798-protein ID=TCONS_00019798-protein|Name=TCONS_00019798-protein|organism=Clytia hemisphaerica|type=polypeptide|length=517bp
MRSISLVNKLEVDYKGSLFKSAICLVDIDEDGLNELCVGFTNGELHAYKG
LDTTKPWKLSKGLGSLVVLCGGHVRSKDETLLCALDSEGRCNLFDVKEEH
VTSDHDGSYVGSPPSGAPTCSPTEEMRLVHKEHLPPNAKVAILEDVDNDG
VAELIIGYTDRYVRIYKWTVQGDPLDDVEKKLSKQNTEETDKKSTLSFSL
SLSKEPKHLSPAPRQKSADTAEEGTINNNNSTPYHPVGSFVLLKQFSLIG
QIGSLAVCTTVEGLNQLIVSQPNGGYCILGQYDEDGFTENISTPTSVEAP
SPSNQDSYPIFYPITAYGNRSFQQQHINTEIIGGIRRQKGATGVIGLATH
DGYFIILDNTYFSGQNPVKNSSKNNWFAMSKVDVTNDGDDEIVLCDLNGM
TYIIDKERNIVSYNFNENVAAFCAGYYGNKGRSTPCLCYVTLSGKIHLYY
DVWIDAIKVRCVHAALIEKIKRKPELHYLLELLRGESGEVDHEKLQSLVK
QSASLNRFSSSLFTKNR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011133	XLOC_011133	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00019798	TCONS_00019798	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031793	Itfg2

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.130.10.130		coord: 2..411 e-value: 3.2E-15 score: 55.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..231
None	No IPR available	SUPERFAMILY	69318	Integrin alpha N-terminal domain	coord: 13..67 coord: 137..168
IPR031793	Integrin-alpha FG-GAP repeat-containing protein 2	PFAM	PF15907	Itfg2	coord: 52..188 e-value: 1.5E-24 score: 86.7 coord: 236..452 e-value: 1.4E-44 score: 152.5

Blast

[Close]

BLAST of TCONS_00019798-protein vs. Swiss-Prot (Human)
Match: ITFG2 (KICSTOR complex protein ITFG2 OS=Homo sapiens GN=ITFG2 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 3.170e-73
Identity = 157/490 (32.04%), Postives = 247/490 (50.41%), Query Frame = 0

Query:    1 MRSISLVNKLEVDYKGSLFKSAICLVDIDEDGLNELCVGFTNGELHAYKGLDTTKPWKLSKGLGSLVVLCGGHVRSKDETLLCALDSEGRCNLFDVKEEHV--TSDHDGSYVGSPPSGAPTCSPTEEMRLVHKEHLPPNAKVAILEDVDNDGVAELIIGYTDRYVRIYKWTVQGDPLDDVEKKLSKQNTEETDKKSTLSFSLSLSKEPKHLSPAPRQKSADTAEEGTINNNNSTPYHPVGSFVLLKQFSLIGQIGSLAVCTTVEGLNQLIVSQPNGGYCILGQYDEDGFTENISTPTSVEAPSPSNQDSYPIFYPITAYGNRSFQQQHINTEIIGGIRRQKG----ATGVIGLATHDGYFIILDNTYFSGQNPVKNSSKNNWFAMSKVDVTNDGDDEIVLCDLNGMTYIIDKERNIVSYNFNENVAAFCAGYYGNK-GRSTPCLCYVTLSGKIHLYYDVWIDAIKVRCVHAALIEKIKRKPELHYLLELL 483
            MRS+S V ++ +++ GSLF  AICL D+D D LNEL VG T+G++  YK  D ++PW      G L  +  G V +K + LL A+ +EG  +LFD+    V   S H  + +G            EE R V K+H+P N KV ++ D+D DG  EL++GYTDR VR ++W                   EE            L + P+HL+                           G  V LK++ L GQ+ SL+V     GL +L+VSQP   Y IL       + ++  +P + E P+  ++++      +    +     ++++T +IG I++  G     +G+  L T DG   +++    + +        +  FA+ K+DVT +G +E+V C  +G TYIID  R +V +  +EN+ AFCAG Y  K GR++PCL YVT + KI++Y++V ++    R     L++ ++ KPE H LL+ L
Sbjct:    1 MRSVSYVQRVALEFSGSLFPHAICLGDVDNDTLNELVVGDTSGKVSVYKN-DDSRPWLTCSCQGMLTCVGVGDVCNKGKNLLVAVSAEGWFHLFDLTPAKVLDASGHHETLIG------------EEQRPVFKQHIPANTKVMLISDIDGDGCRELVVGYTDRVVRAFRW-------------------EE------------LGEGPEHLT---------------------------GQLVSLKKWMLEGQVDSLSVTLGPLGLPELMVSQPGCAYAILLCT----WKKDTGSPPASEGPTDGSRETPAARDVVLHQTSGRIHNKNVSTHLIGNIKQGHGTESSGSGLFALCTLDGTLKLMEEMEEADKLLWSVQVDHQLFALEKLDVTGNGHEEVVACAWDGQTYIIDHNRTVVRFQVDENIRAFCAGLYACKEGRNSPCLVYVTFNQKIYVYWEVQLE----RMESTNLVKLLETKPEYHSLLQEL 411

The following BLAST results are available for this feature:

BLAST of TCONS_00019798-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00019798-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ITFG2	3.170e-73	32.04	KICSTOR complex protein ITFG2 OS=Homo sapiens GN=I...	[more]

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TCONS_00019798-protein (polypeptide) - C. hemisphaerica