TCONS_00019738-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019738-protein
Unique NameTCONS_00019738-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length414

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019738-protein ID=TCONS_00019738-protein|Name=TCONS_00019738-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MLSDQERKRFEALWELFYAEVRYLINNLVVLHDVFAKPLQHAKSFGFLTC
VNESLLFANLDDLIQATSDFANKLLKIFNDCALSVCRSTEIIVDGFKMFD
DCLTPKYNEYSLNYQKAKSHLELLRDDETFQEFLKYCEQDPRCNRRHIED
FLVAPLQHLTKLPLLLKAIRKHSPQNDHNHHLLTHTIYDIEQSIKSIEKK
ISSLMNFQRLQEIQELVVWPVLGDMDKKNEIPEFVRSDLNNNHSVTVLMN
PNRTLLQEGALILADNNKTEFYVFLFDDMLLLTKPRKRVKPRRNTGPDER
SGNEPTLNRNKKQQSLSDAYNSSNYIVHKQPLSIDRLKIYDCDDQASGSS
GMKNAFCLVNFNRYHQAVCAYTFITSTPEEKTLWMKNIKKAKDDATSEGF
SSAKDMSSDEEYML
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011103XLOC_011103Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019738TCONS_00019738Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR000219DH-domain
IPR011993PH_dom-like
Vocabulary: Biological Process
TermDefinition
GO:0035023regulation of Rho protein signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005089Rho guanyl-nucleotide exchange factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035023 regulation of Rho protein signal transduction
molecular_function GO:0005089 Rho guanyl-nucleotide exchange factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableGENE3D1.20.900.10coord: 6..230
e-value: 1.1E-38
score: 132.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..315
NoneNo IPR availableCDDcd00160RhoGEFcoord: 9..198
e-value: 2.62188E-21
score: 88.894
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 255..395
e-value: 9.1E-9
score: 45.1
IPR001849Pleckstrin homology domainPFAMPF16652PH_13coord: 244..393
e-value: 2.1E-6
score: 27.6
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 254..393
score: 10.827
IPR000219Dbl homology (DH) domainSMARTSM00325RhoGEF_3coord: 12..199
e-value: 6.7E-22
score: 88.7
IPR000219Dbl homology (DH) domainPFAMPF00621RhoGEFcoord: 13..196
e-value: 1.3E-25
score: 90.6
IPR000219Dbl homology (DH) domainPROSITEPS50010DH_2coord: 8..200
score: 23.055
IPR000219Dbl homology (DH) domainSUPERFAMILY48065DBL homology domain (DH-domain)coord: 2..216
IPR011993PH domain-likeGENE3D2.30.29.30coord: 240..399
e-value: 1.3E-22
score: 79.7
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 250..393

Blast
[Close]
BLAST of TCONS_00019738-protein vs. Swiss-Prot (Human)
Match: PKHG7 (Pleckstrin homology domain-containing family G member 7 OS=Homo sapiens GN=PLEKHG7 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.185e-56
Identity = 123/363 (33.88%), Postives = 189/363 (52.07%), Query Frame = 0 
Query:   34 VFAKPLQHAKSFGFLTCVNESLLFANLDDLIQATSDFANKLLKIFNDC--ALSVCRSTEIIVDGFKMFDDCLTPKYNEYSLNYQKAKSHLELLRDDETFQEFLKYCEQDPRCNRRHIEDFLVAPLQHLTKLPLLLKAIRKHSPQNDHNHHLLTHTIYD-IEQSIKSIEKKISSLMNFQRLQEIQELVVWPVLGDMDKKNEIPEFVRSDLNNNHSVTVLMNPNRTLLQEGALILADNNK-TEFYVFLFDDMLLLTKPRKRVKPRRNTGPDERSGNEPTLNRNKKQQSLSDAYN-SSNYIVHKQPLSIDRLKIYDCDDQASGSSGMKNAFCLVNFNRYHQAVCAYTFITSTPEEKTLWMKNIKKA 391
            +F   L++ ++  +L  V+   LFANL++L Q +  F N L  I  D   A  +  S + I    K F   L   +  Y LNY  A  +LE LR  + F  +LK+CEQ+ +C R H+ + LVAPLQ LT+ PLLLK I K S   D    ++ ++I + +E+SI+ +E K+  L NFQ+ + +QE++VWP L D DK+  IPE ++     + +  +L   +R LL EG L LA++ +  + Y+FLF+D LL+TK +   K        +  G++P L        L        +  V  QP+ +DRL +   +       G++NAF + + NRY Q + A+     T   K  WM  I  A
Sbjct:    2 IFMNTLRYLQTHEYLLDVDLWRLFANLEELTQTSLGFVNSLFGIIKDYVDASEISSSLDFISVLTKYFRGSLCQSHQTYCLNYSAAIFYLESLRQRDDFGIYLKWCEQNEQCRRLHVPELLVAPLQRLTRYPLLLKNIWKRS--MDSAEKIMIYSIKEKVEKSIRDLEGKVKWLDNFQKFRYLQEIIVWPPLWDRDKRFFIPECLKHIFKEHMAENILSPTSRHLLYEGKLTLAESTRFLDVYLFLFNDFLLVTKTKCNKK--------KLGGSDPGLMCPSLTPELQAVIKEGGSCTVLDQPIPLDRLVVKSIEPLHVSVFGLRNAFLIQHENRYRQCIAAFLLQAQTENIKKTWMAQITTA 354
The following BLAST results are available for this feature:
BLAST of TCONS_00019738-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKHG77.185e-5633.88Pleckstrin homology domain-containing family G mem... [more]
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