TCONS_00019704-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019704-protein
Unique NameTCONS_00019704-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length478

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019704-protein ID=TCONS_00019704-protein|Name=TCONS_00019704-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
MNVLDDLPEGLDDLRIREGGFNDGHVRTSGIDIQKLNKGLESNFEIQMKD
EQDDVPQPETNENQFNPQELFQQLNYECNDTEVSDPALEHLSPFERMKQT
MEDISPVGDGGIMKMILKHGAGSVVPPRSLCRVHYNGYFEFNDEPFDSSR
LRGRQHQFKLGEGEILMGWEIGIGTMKRGELARFIMTSQYAYGKYGCPPR
IPKDATPMFEIELISFVDQGAADDYESFTEEERKKATFEEILGAVDALRK
TGNEAFELNQVKRASTSYMRAIRLLENANLKNEYEEIEMKKSALKLYLNM
TLMDLKEAKSGRACKHARKALEIEPKNVKALYRLARALHQLGDLESAKKE
IWKAHRYSPGNEEVMKEMRQLDNELARYKRKDQALSRKMLNLDPMPKKAA
APKNPTPAQSQMLKMVLDRLKSFKNSSDLPEMRLPDTLTQEEVDSVKIAV
NELDLFFSSTQANGQTMIIVSKTSLQEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011093XLOC_011093Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019704TCONS_00019704Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001179PPIase_FKBP_dom
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 361..388
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availableGENE3D3.10.50.40coord: 34..236
e-value: 1.6E-30
score: 105.4
NoneNo IPR availablePFAMPF14559TPR_19coord: 307..370
e-value: 8.8E-7
score: 29.3
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 107..220
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 328..361
e-value: 0.066
score: 22.3
coord: 294..327
e-value: 91.0
score: 6.5
coord: 245..278
e-value: 37.0
score: 9.9
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 128..214
e-value: 4.3E-20
score: 71.7
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 128..217
score: 22.292
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 237..388
e-value: 6.2E-18
score: 64.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 243..386
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 245..278
score: 7.071
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 294..361
score: 14.583

Blast
[Close]
BLAST of TCONS_00019704-protein vs. Swiss-Prot (Human)
Match: FKBP6 (Inactive peptidyl-prolyl cis-trans isomerase FKBP6 OS=Homo sapiens GN=FKBP6 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.943e-50
Identity = 103/299 (34.45%), Postives = 167/299 (55.85%), Query Frame = 0 
Query:   92 SPFERMKQTMEDISPVGDGGIMKMILKHGAGSVVPPRSLCRVHYNGYFEFNDEPFDSSRLRGRQHQFKLGEGEILMGWEIGIGTMKRGELARFIMTSQYAYGKYGCPPRIPKDATPMFEIELISFVDQGAADDYESFTEEERKKATFEEILGAVDALRKTGNEAFELNQVKRASTSYMRAIRLLENANLKNEYEEIEMKKSALKLYLNMTLMDLKEAKSGRACKHARKALEIEPKNVKALYRLARALHQLGDLESAKKEIWKAHRYSPGNEEVMKEMRQLDNELARYKRKDQALSRKML 390
            S +ER+ Q M DIS  GD G++K +++ GAG +V P +   V Y+GY E  D PFDS+  R      KLGE   L G E+G+ +M+RGELARF+    YAYG  GCPP IP + T +FEIEL+ F+D   +D + + + E++ +   +++L      R+ GN  F  N+   A   Y RA+ LL   +   E + + ++ + L + LN++   LK  +   A  +  +AL I+ KN KAL+R  +A   L + + A+  + +A +  P N ++  E+++L +    Y  K++ +  +M 
Sbjct:   20 SLYERLSQRMLDIS--GDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNYLFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHL-VEAAKLPVLLNLSFTYLKLDRPTIALCYGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCYRDYVDKEKEMWHRMF 315
The following BLAST results are available for this feature:
BLAST of TCONS_00019704-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FKBP61.943e-5034.45Inactive peptidyl-prolyl cis-trans isomerase FKBP6... [more]
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