TCONS_00019646-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019646-protein
Unique NameTCONS_00019646-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length327

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019646-protein ID=TCONS_00019646-protein|Name=TCONS_00019646-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MERLRFEYSYKNIPIPSERNYKIQLIEKVEKFIKRMRWKAKFFDQADNEE
IVQIPETYGLKTQKCPPQIRELIPFENDLIELITTVKFRYQHNQFQQKLK
DDIHTINNTTTTLTFADKTTNLYKLSKAEYNKLLHNAITSNYEKSNVEVE
REIISRGKSLVKNKNIFNRMLTNGKNDAFITLKDHKPNFQNNPKTRLLNP
AKNELGRISKSILDKINKELKNNLQINQWKNTNEVIQWFKNIPQKETKTF
TVFDIKDFYPSITENLLKKAISFAKQKTKISNEDIKIINHARQSLLFNND
EPWVKKGGQLFDVTMGAYDGAEVCELV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011057XLOC_011057Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019646TCONS_00019646Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016151DNA_mismatch_repair_MutS_N
Vocabulary: Molecular Function
TermDefinition
GO:0030983mismatched DNA binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006298 mismatch repair
molecular_function GO:0005524 ATP binding
molecular_function GO:0030983 mismatched DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016151DNA mismatch repair protein MutS, N-terminalGENE3D3.40.1170.10coord: 219..299
e-value: 0.0015
score: 18.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019646-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top