TCONS_00019639-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019639-protein
Unique NameTCONS_00019639-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length305

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019639-protein ID=TCONS_00019639-protein|Name=TCONS_00019639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
MKSHLIFLAILLPTLVISDDISLLKSQIQQLQTELAKEKAEIKVLQSKDK
ARNGICGIKSNPCGSCLCVEDYNTHQKYFCDCRAKPARKDCREHYDQGER
TNGLYQIILFELNIIQVFCDHETSPGGWTVIQRRMDGSENFYRSWEEYKN
GFGQLHREHWLGNEHISTLTAQAAITGSELRIDMKFAKRQTEYSMLYGNF
DVGRESTGYQLYVVDRKSSFGMELHNGMKFSTYDKDQDPNPDFNCAVTLR
AGWWFHDCESDANLNQSCNLNGQYDMLEIYYDLRNVFSWKANYRLGVSEM
KVRRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011050XLOC_011050Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019639TCONS_00019639Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..48
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 86..305
e-value: 9.1E-56
score: 201.3
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 88..303
e-value: 1.1E-49
score: 169.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 82..305
score: 44.221
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 86..305
e-value: 3.04309E-74
score: 228.664
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 83..303
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 16..228
e-value: 1.3E-52
score: 178.0
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 229..298
e-value: 2.3E-16
score: 59.2

Blast
[Close]
BLAST of TCONS_00019639-protein vs. Swiss-Prot (Human)
Match: FBCD1 (Fibrinogen C domain-containing protein 1 OS=Homo sapiens GN=FIBCD1 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.554e-41
Identity = 93/235 (39.57%), Postives = 126/235 (53.62%), Query Frame = 0 
Query:   80 CDCRAKPARKDCREHYDQGERTNGLYQIILFELNI-IQVFCDHETSPGGWTVIQRRMDGSENFYRSWEEYKNGFGQLHREHWLGNEHISTLTAQAAITGSELRIDMKFAKRQTEYSMLYGNFDVG-----RESTGYQLYVVDRKSSFGMEL--HNGMKFSTYDKDQDPNPDFNCAVTLRAGWWFHDCESDANLNQSCNLNGQY--DMLEIYYDLRNVFSWKA-NYRLGVSEMKVR 303
            C   ++P  +DC +    G++ +G+Y +         QV+CD  T  GGWTV QRR DGS NF+R W+ Y++GFG+L  EHWLG + I  LT QAA    EL +D++  +  T Y+  YG+F VG      E  GY L V D   + G  L  H+GM+F+T D+D D + + NCA   R  WW+ +C        + NLNGQY       Y D     SW    Y L  SEMK+R
Sbjct:  235 CATGSRP--RDCLDVLLSGQQDDGVYSVFPTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWDAYRDGFGRLTGEHWLGLKRIHALTTQAAY---ELHVDLEDFENGTAYAR-YGSFGVGLFSVDPEEDGYPLTVADYSGTAGDSLLKHSGMRFTTKDRDSD-HSENNCAAFYRGAWWYRNC-------HTSNLNGQYLRGAHASYADGVEWSSWTGWQYSLKFSEMKIR 455
The following BLAST results are available for this feature:
BLAST of TCONS_00019639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBCD11.554e-4139.57Fibrinogen C domain-containing protein 1 OS=Homo s... [more]
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