TCONS_00019632-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019632-protein
Unique NameTCONS_00019632-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019632-protein ID=TCONS_00019632-protein|Name=TCONS_00019632-protein|organism=Clytia hemisphaerica|type=polypeptide|length=122bp
MAAIRKKLVIVGDGACDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDENTKWELQKQKQEPVKMEEGEVMANKISAYAYLECSAKSKEGVREV
FETATRAALQSKKKKKKGCVLI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011045XLOC_011045Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019632TCONS_00019632Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 7..111
e-value: 0.0098
score: -64.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 7..111
e-value: 7.9E-4
score: -61.9
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 8..111
e-value: 4.9E-30
score: 115.8
NoneNo IPR availableGENE3D3.40.50.300coord: 9..112
e-value: 8.1E-28
score: 96.0
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 17..109
e-value: 1.4E-19
score: 70.1
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 19..89
e-value: 2.4E-13
score: 48.1
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 1..121
score: 9.514
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..109

Blast
[Close]
BLAST of TCONS_00019632-protein vs. Swiss-Prot (Human)
Match: RHOA (Transforming protein RhoA OS=Homo sapiens GN=RHOA PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.734e-57
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0 
Query:    9 VIVGDGACDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDENTKWELQKQKQEPVKMEEGEVMANKISAYAYLECSAKSKEGVREVFETATRAALQSKK-KKKKGCVLI 122
            VI+   + DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE+T+ EL K KQEPVK EEG  MAN+I A+ Y+ECSAK+K+GVREVFE ATRAALQ+++ KKK GC+++
Sbjct:   79 VILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKKKSGCLVL 193
The following BLAST results are available for this feature:
BLAST of TCONS_00019632-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHOA1.734e-5773.91Transforming protein RhoA OS=Homo sapiens GN=RHOA ... [more]
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