TCONS_00019611-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019611-protein
Unique NameTCONS_00019611-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1440

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019611-protein ID=TCONS_00019611-protein|Name=TCONS_00019611-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1440bp
MVRSKKRSLTTQNSRGNQENKDQESKKKRKSTIGGLEEQFEICKIISQHG
FIFAPDENEPNQLGIDQAIFIKKITNIFHKYTKQEIKSFTESLENFWQNS
HRFCFSLLPTKTNEECQFSSRGKEQESLTRLLLSVNEIQTPIANLLLEKI
PELDFNQDLVNTATKLGDIDLTQMIIGQLKFLDNIVDRKELTSKIMEIIS
VSNVDAQKDLISCLPELVDDECDEILLNKLQEMLKTSQLVTSVLDALSNM
NVKNDSLSEIRTSVIDVLESADISDLPIVIKFLQNTSNEENIVDTLLEAR
EKLNITNFAIPNQSSTPFQRNNANSRKHLDDELLIFDSIRSGIRFQKMIA
DAWVKVLDSIMKSKNHKVLDLYVLVVLYSFKHKRKQLNTMFRNKIKTGVF
NEEIVSKALHSHSQVFSQYLKELLMVSELLLRATDATVSAYGCNLYKQMF
MSFEAFPQQEVVAALVTHIGSGYGLEIDAAFSVAMVLAEEVTSKMAPFTI
FFKGLLDYLVNLNISQIRTLFNIISKLVVQGTNGNNNNMPGQFINDDLYM
VIRKQLSSKDFKFKRIGVIGGMALLKNITRKNSNSVFLGDNGTDLPDDVV
DQVIDLLKVMMESVVSNVQATALFYDELALMLLQMEHTNDKLLEWITDKV
VSDFQQDFLTDADDFKSRIGDGQCGLQYDLDAPEEGGICVNIFPVLTKET
DPNLPSSSTITGRQSKLLILPAIFRLVATCEVKQNEGSLEGIDALLGCPL
VLAEDRIFNKWQTFSDHELTTHALALFHAINWMREVINAFTGENVDAEIR
GKIISRIKTLILLSNRLETLMAASHNFQLPITDFSVDEAMLKTVKTSSSG
GETKKKTSKSKQKDTTSNNTTSANATIGAATTTNNDGEQPSSDKEDDDGS
KNNEDINATIESSYASILRYPASFRPLSLTVFYALSYEGVSKAIMDTEQH
TKTREDLNLSANDINFMLVDLQRKLEYSLGNSKRSFLKQSASKVIGFSNL
PSDMKVIKFMKKIIPSLICHFKFVKNFFTDEDASMTNESLEETDHYINLY
NNLVQCLTLLFNWSKFTSQHTKELESIVDIFVKTLDDVTITKKKMNFHEK
LVLIIKSFQPELSELQHISMAVKICKFISSMSQYLEKEDGNENGGNVDDE
SSNETCKKMKRDLLLKLLRHRWKDAKGSVFNDHYSYLIRNYLKTCSDSLG
FIEKFCACPIQQTLSNEAVEEYPTLTKVTAICFYRSFYEELNGFVKTRLV
STTRTIVNNEEITNQYLSRTHSALKIFQTMNSLLKEFEGRLFMMVALKYS
KYFLEVFLKNVMPILDRTLRSHKQIVHGILKTAQQSTRSLQHLCNHSKVS
KDIAMTTHVPALKKCLEAFVFRVKAVLAYNNCDGVFWLGNLKNRDLQGNE
IQSQVDPTSQDSEDENETHDAEEGESLNDDEENDECSESF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011035XLOC_011035Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019611TCONS_00019611Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR029448FANCD2
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 125..1439
e-value: 3.0E-8
score: 32.2
IPR029448Fanconi anaemia protein FANCD2PFAMPF14631FancD2coord: 1..1417
e-value: 1.4E-278
score: 927.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1399..1440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 845..905
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Blast
BLAST of TCONS_00019611-protein vs. Swiss-Prot (Human)
Match: FACD2 (Fanconi anemia group D2 protein OS=Homo sapiens GN=FANCD2 PE=1 SV=2)

HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0
Identity = 453/1477 (30.67%), Postives = 752/1477 (50.91%), Query Frame = 0
Query:    6 KRSLTTQNSRGNQENKDQESKKKRKSTIGG-LEEQFEI-CKIISQHGFIFAPDENEPNQLGIDQAIFIKKITNIF--HKYTKQEIKSFTESLENFWQNSHRFCFSLLPTKTNEECQFSSRGKEQESLTRLLLSVNEIQTPIANLLLEKIPELDF---NQDLVNTATKLGDIDLTQMIIGQLKFLDNIVDRKELTSKIMEIISVSNVDAQKDLISCLPELVDDECDEILLNKLQEML-KTSQLVTSVLDALSNMNVKNDSLSEIRTSVIDVLESADISDLPIVIKFLQNTSNEENIVDTLLEAREKLNITNFAIPN--QSSTPFQRNNANSRKHLDDE-------LLIFDSIRSGIRFQKMIADAWVKVLDSIMKSKNHKVLDLYVLVVLYSFK-HKRKQLNTMFRNKIKTGVFNEEIVSKALHSHSQVFSQYLKELLMVSELLLRATDATVSAYGCNLYKQMFMSFEAFPQQEVVAALVTHIGSGYGLEIDAAFSVAMVLAEEVTSKMAPFTIFFKGLLDYLVNLNISQIRTLFNIISKLVVQGTNGNNNNMPGQFINDDLYMVIRKQLSSKDFKFKRIGVIGGMALLKNITRKNSNSVFLGDNGTDLPDDVVDQVIDLLKVMMESVVSNVQATALFYDELALMLLQMEHTNDKLLEWITDKVVSDFQQDFLTDA-----DDFKSRIGDGQCGLQYDLDAPEEGGICVNIFPVLTKE--TDPNLPSSSTITGRQ--SKLLILPAIFRLVATCEVKQNEGSLEGIDALLGCPLVLAEDRIFNKWQTFSDHELTTHALALFHAINWMREVINAFTGENVDAEIRGKIISRIKTLILLSNRLETLMAASHNFQLPITDFSVDEAMLKTVKTSSSGGETKKKTSKSKQKDTTSNNTTSANATIGAATTTNNDGEQPSSDKEDDDGSKNNEDINATIESSYASILRYPASFRPLSLTVFYALSYEGVSKAIMDTEQHTKTREDLNLSANDINFMLVDLQRKLEYSLGNS---KRSFLKQSASKVIGFSNLP--SDMKVIKFMKKIIPSLICHFKFVKNFF----TDEDASMTNESLEETDHYI--NLYNNLVQCLTLLFNWSKFTSQHTKEL-ESIVDIFVKTLDDVTITKKKMNFHEKLVLIIKSFQPELSELQHISMAVKICKFISSMSQYLEKEDGNENGGNVDDESSNETCKKMKRDLLLKLLRHRWKDA---KGSVFNDHYSYLIRNYLKTCSDSLGFIEKFCACPIQQTLS---NEAVEEYPTLTKVTAICFYRSFYEELNGFVKTRLVSTTRTIVNNEEITNQYLSRTHSALKIFQTMNSLLKEFEGRLFMMVALKYSKYFLEVFLKNVMPILDRTLRSHKQIVHGILKTAQQSTRSLQHLCNHSKVSKDIAMTTHVPALKKCLEAFVFRVKAVLAYNNCDGVFWLGNLKNRDLQGNEIQSQVDPTSQDSEDENETHDAEEGESLNDDEENDECS 1437
            K SLT   S+     K   SKK +KS I   +EE   I  K++   G I    E++ NQL +DQ  F KK+      H    + I+ F   LE++ ++   F   LL  +  ++ + S      +SL +LLL ++ +Q  I   L EK+PE  F   N D         +I++ ++I+ QLK+LD +VD K+LT+KIM++IS++  + Q D+I+ LPE++ D     +  +L ++L + + L   +LD LS++ +  + L ++R  V+D L S  + DLP++IKF+ ++    + ++ + E REKL++ +  +P+  Q+S    ++   +    + E       +L+FD I+S IR++K I++AW+K +++      HKV DL +L ++YS     +K ++ + RNKI++G   E+++      H  V       +L +++ LL + D ++ ++G  LYK  F  F+ + QQEVV ALVTHI SG   E+D A  V + L     S M    +F KG+LDYL N++  QIR LF ++S L     N  +++     I DD+++VIRKQLSS  FK+K IG+IG + +   +    S S  L     +L D+   QV  LL+++      + QA+AL+YDE A  L+Q E  + K LEW+   + +DFQ  F+ D+      DF   +       +YD     + GI +N+ P+L  +       P +S  +G++  S L + P  FRL+  C  +Q+ G+LE ID LL CP+ L +     K ++ S  E +     +F  +NW RE++NAF  E    E++GK+++R+K ++ L   LE  +A + ++  P+ +F V E +  T  T ++     +K  K ++K  T  + TS++ T+     +  D       + + + +   E  +  + +S+A        FR L + VF  L    V+K I+DTE HT+  E + L   ++ F+L DL +KLE  L      +  FLK   S+ IGFS+L   S  +++  + +++  +  H + + N+F     +    +    ++  +++I  + Y  L+Q    LF WS F+    + L  S + +    L     ++       + V  +++F   +   Q     +++   I      LEK   +          + E    + R  L ++    W      K ++ ND    L+  YL+     L  IE+     + + ++   + +   +PTLT+ T + F+R    EL   VK        T  ++++I  + L   + A++ F  + +L+K F+    + V LKY + F+E FLK  MP+LD + R H++ V  +L+T Q  TR L HLC HSK+ +D  +T HVP LKK LE  V RVKA+L  NNC   FWLGNLKNRDLQG EI+SQ    S   E E++           +D E DE S
Sbjct:   13 KESLTEDASKTR---KQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILKTGESQ-NQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERLQDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSD---------EINIPRLIVSQLKWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTSLTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISELREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTISEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQSTFSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTHICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLAFSKQNEASSH-----IQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERANLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFA-NLIQHEKLDPKALEWVGHTICNDFQDAFVVDSCVVPEGDFPFPVKALYGLEEYD----TQDGIAINLLPLLFSQDFAKDGGPVTSQESGQKLVSPLCLAP-YFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERSFMCSLIFLTLNWFREIVNAFCQET-SPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPLGNFDV-ETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHRGQLNKEFTGKEEKTSLLLHNSHAF-------FRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQLGPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLLTPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQPENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMVI------LEKSTASAQ--------NKEKIASLARQFLCRV----WPSGDKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKK---IEPGTAADSQQIHEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKHREDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNCREAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVS 1435          
The following BLAST results are available for this feature:
BLAST of TCONS_00019611-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FACD20.000e+030.67Fanconi anemia group D2 protein OS=Homo sapiens GN... [more]
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