|
Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00019611-protein ID=TCONS_00019611-protein|Name=TCONS_00019611-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1440bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00019611-protein vs. Swiss-Prot (Human)
Match: FACD2 (Fanconi anemia group D2 protein OS=Homo sapiens GN=FANCD2 PE=1 SV=2) HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0 Identity = 453/1477 (30.67%), Postives = 752/1477 (50.91%), Query Frame = 0
Query: 6 KRSLTTQNSRGNQENKDQESKKKRKSTIGG-LEEQFEI-CKIISQHGFIFAPDENEPNQLGIDQAIFIKKITNIF--HKYTKQEIKSFTESLENFWQNSHRFCFSLLPTKTNEECQFSSRGKEQESLTRLLLSVNEIQTPIANLLLEKIPELDF---NQDLVNTATKLGDIDLTQMIIGQLKFLDNIVDRKELTSKIMEIISVSNVDAQKDLISCLPELVDDECDEILLNKLQEML-KTSQLVTSVLDALSNMNVKNDSLSEIRTSVIDVLESADISDLPIVIKFLQNTSNEENIVDTLLEAREKLNITNFAIPN--QSSTPFQRNNANSRKHLDDE-------LLIFDSIRSGIRFQKMIADAWVKVLDSIMKSKNHKVLDLYVLVVLYSFK-HKRKQLNTMFRNKIKTGVFNEEIVSKALHSHSQVFSQYLKELLMVSELLLRATDATVSAYGCNLYKQMFMSFEAFPQQEVVAALVTHIGSGYGLEIDAAFSVAMVLAEEVTSKMAPFTIFFKGLLDYLVNLNISQIRTLFNIISKLVVQGTNGNNNNMPGQFINDDLYMVIRKQLSSKDFKFKRIGVIGGMALLKNITRKNSNSVFLGDNGTDLPDDVVDQVIDLLKVMMESVVSNVQATALFYDELALMLLQMEHTNDKLLEWITDKVVSDFQQDFLTDA-----DDFKSRIGDGQCGLQYDLDAPEEGGICVNIFPVLTKE--TDPNLPSSSTITGRQ--SKLLILPAIFRLVATCEVKQNEGSLEGIDALLGCPLVLAEDRIFNKWQTFSDHELTTHALALFHAINWMREVINAFTGENVDAEIRGKIISRIKTLILLSNRLETLMAASHNFQLPITDFSVDEAMLKTVKTSSSGGETKKKTSKSKQKDTTSNNTTSANATIGAATTTNNDGEQPSSDKEDDDGSKNNEDINATIESSYASILRYPASFRPLSLTVFYALSYEGVSKAIMDTEQHTKTREDLNLSANDINFMLVDLQRKLEYSLGNS---KRSFLKQSASKVIGFSNLP--SDMKVIKFMKKIIPSLICHFKFVKNFF----TDEDASMTNESLEETDHYI--NLYNNLVQCLTLLFNWSKFTSQHTKEL-ESIVDIFVKTLDDVTITKKKMNFHEKLVLIIKSFQPELSELQHISMAVKICKFISSMSQYLEKEDGNENGGNVDDESSNETCKKMKRDLLLKLLRHRWKDA---KGSVFNDHYSYLIRNYLKTCSDSLGFIEKFCACPIQQTLS---NEAVEEYPTLTKVTAICFYRSFYEELNGFVKTRLVSTTRTIVNNEEITNQYLSRTHSALKIFQTMNSLLKEFEGRLFMMVALKYSKYFLEVFLKNVMPILDRTLRSHKQIVHGILKTAQQSTRSLQHLCNHSKVSKDIAMTTHVPALKKCLEAFVFRVKAVLAYNNCDGVFWLGNLKNRDLQGNEIQSQVDPTSQDSEDENETHDAEEGESLNDDEENDECS 1437
K SLT S+ K SKK +KS I +EE I K++ G I E++ NQL +DQ F KK+ H + I+ F LE++ ++ F LL + ++ + S +SL +LLL ++ +Q I L EK+PE F N D +I++ ++I+ QLK+LD +VD K+LT+KIM++IS++ + Q D+I+ LPE++ D + +L ++L + + L +LD LS++ + + L ++R V+D L S + DLP++IKF+ ++ + ++ + E REKL++ + +P+ Q+S ++ + + E +L+FD I+S IR++K I++AW+K +++ HKV DL +L ++YS +K ++ + RNKI++G E+++ H V +L +++ LL + D ++ ++G LYK F F+ + QQEVV ALVTHI SG E+D A V + L S M +F KG+LDYL N++ QIR LF ++S L N +++ I DD+++VIRKQLSS FK+K IG+IG + + + S S L +L D+ QV LL+++ + QA+AL+YDE A L+Q E + K LEW+ + +DFQ F+ D+ DF + +YD + GI +N+ P+L + P +S +G++ S L + P FRL+ C +Q+ G+LE ID LL CP+ L + K ++ S E + +F +NW RE++NAF E E++GK+++R+K ++ L LE +A + ++ P+ +F V E + T T ++ +K K ++K T + TS++ T+ + D + + + + E + + +S+A FR L + VF L V+K I+DTE HT+ E + L ++ F+L DL +KLE L + FLK S+ IGFS+L S +++ + +++ + H + + N+F + + ++ +++I + Y L+Q LF WS F+ + L S + + L ++ + V +++F + Q +++ I LEK + + E + R L ++ W K ++ ND L+ YL+ L IE+ + + ++ + + +PTLT+ T + F+R EL VK T ++++I + L + A++ F + +L+K F+ + V LKY + F+E FLK MP+LD + R H++ V +L+T Q TR L HLC HSK+ +D +T HVP LKK LE V RVKA+L NNC FWLGNLKNRDLQG EI+SQ S E E++ +D E DE S
Sbjct: 13 KESLTEDASKTR---KQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILKTGESQ-NQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERLQDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSD---------EINIPRLIVSQLKWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTSLTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISELREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTISEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQSTFSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTHICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLAFSKQNEASSH-----IQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERANLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFA-NLIQHEKLDPKALEWVGHTICNDFQDAFVVDSCVVPEGDFPFPVKALYGLEEYD----TQDGIAINLLPLLFSQDFAKDGGPVTSQESGQKLVSPLCLAP-YFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERSFMCSLIFLTLNWFREIVNAFCQET-SPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPLGNFDV-ETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHRGQLNKEFTGKEEKTSLLLHNSHAF-------FRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQLGPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLLTPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQPENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMVI------LEKSTASAQ--------NKEKIASLARQFLCRV----WPSGDKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKK---IEPGTAADSQQIHEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKHREDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNCREAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVS 1435 The following BLAST results are available for this feature:
BLAST of TCONS_00019611-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|
