TCONS_00019603-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019603-protein
Unique NameTCONS_00019603-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019603-protein ID=TCONS_00019603-protein|Name=TCONS_00019603-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
MASRSSVKKESQSSMLEDMDNLNQQDQKGSMGQEHSFLMDQTYVEEMEEG
LLKLLNNFKSDKLNAFDENCSLEKMRQIKNMQEGLAQLHFNLENEETSQA
ALSEDDRTKKNQDKMKKLMKNLENLCSSVQNLHQHLDINE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011027XLOC_011027Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019603TCONS_00019603Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025271DUF4061
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025271Domain of unknown function DUF4061PFAMPF13270DUF4061coord: 44..130
e-value: 5.2E-25
score: 87.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39

Blast
[Close]
BLAST of TCONS_00019603-protein vs. Swiss-Prot (Human)
Match: CC28B (Coiled-coil domain-containing protein 28B OS=Homo sapiens GN=CCDC28B PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 2.460e-18
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 0 
Query:   34 EHSFLMDQTYVEEMEEGLLKLLNNFKSDKLNAFDENCSLEKMRQIKNMQEGLAQLHFNLE----------NEETSQAALSEDDRTKKNQDKMKKLMKNLENLCSSVQNLH 133
            +HSFL + T V EME GLL LLN+F S +L AF + CS E++  ++ MQE LA+LHF+L+           E+     L E+ +       + +L+ NLE+L +S+Q LH
Sbjct:   78 QHSFLTEVTDVYEMEGGLLNLLNDFHSGRLQAFGKECSFEQLEHVREMQEKLARLHFSLDVCGEEEDDEEEEDGVTEGLPEEQKKTMADRNLDQLLSNLEDLSNSIQKLH 187
The following BLAST results are available for this feature:
BLAST of TCONS_00019603-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC28B2.460e-1840.00Coiled-coil domain-containing protein 28B OS=Homo ... [more]
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