TCONS_00019525-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019525-protein
Unique NameTCONS_00019525-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length566

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019525-protein ID=TCONS_00019525-protein|Name=TCONS_00019525-protein|organism=Clytia hemisphaerica|type=polypeptide|length=566bp
MTSANEMVKSQKGYAELQKNTIKEREAVNEAQEKIRKGTIGLFSSKAKQE
KALSKANERREIAEKRSTSARNDYLLYIAATNAHQMKYYALDLPDLIAVQ
DGNIYENFKEYYNVITEAEKEVCEQELQNIQVLQEDIEQLQRAHAIQFFL
KENPVFTKCIPYDMMPCTGDEVCNISHEFEAGLALNKEARKWCNRMVQKQ
KMIRKKNKQLTKLKQAVSTDNDLNQVAEPPQPEKGEKGEKGEKPKTREEM
IEALTEEIRHLEVIRTKAEGRIQALKLAGIDTDNWLQGALTEIGETDDED
ENENHPTQIQTGYDYSDEDNDFDAGDWDDPPNENLSVAAYSDDALSITSS
DVTRTGTPAVIIYPFEATSPEELTVNDNEEIDFLETLGDGWCKVRNKSGQ
VGFVPESYIEVRARGTSVATYATSNQSSTSSPAGSTVSDAWQVSLVPGEQ
PLPEVEVQQAQSPNYVCYAKAVYDYDACEDEELSFKEGDVIMVTSQEVDD
DDGWWEGVLNGKRGVFPSIVVEETTPPVDVPVARQRAQTDQYNSSTYNHG
TTGDVGRTYSMINERT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010972XLOC_010972Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019525TCONS_00019525Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR031160F_BAR
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..34
NoneNo IPR availableCOILSCoilCoilcoord: 196..216
NoneNo IPR availableCOILSCoilCoilcoord: 46..73
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableCOILSCoilCoilcoord: 251..271
NoneNo IPR availableGENE3D2.30.30.40coord: 383..466
e-value: 3.6E-10
score: 38.8
NoneNo IPR availableGENE3D2.30.30.40coord: 41..382
e-value: 4.3E-5
score: 22.7
NoneNo IPR availableGENE3D2.30.30.40coord: 467..545
e-value: 3.7E-22
score: 77.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..557
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..246
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 512..524
score: 35.38
coord: 501..510
score: 39.3
coord: 467..477
score: 39.23
coord: 481..496
score: 38.79
IPR001452SH3 domainSMARTSM00326SH3_2coord: 357..413
e-value: 4.3E-12
score: 56.2
coord: 467..525
e-value: 1.4E-22
score: 91.0
IPR001452SH3 domainPFAMPF14604SH3_9coord: 471..522
e-value: 1.3E-15
score: 56.9
IPR001452SH3 domainPFAMPF00018SH3_1coord: 362..405
e-value: 1.5E-10
score: 40.4
IPR001452SH3 domainPROSITEPS50002SH3coord: 354..414
score: 12.139
IPR001452SH3 domainPROSITEPS50002SH3coord: 464..526
score: 16.758
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 356..435
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 461..528
IPR031160F-BAR domainPROSITEPS51741F_BARcoord: 1..145
score: 16.484
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 4..156

Blast
[Close]
BLAST of TCONS_00019525-protein vs. Swiss-Prot (Human)
Match: FCSD2 (F-BAR and double SH3 domains protein 2 OS=Homo sapiens GN=FCHSD2 PE=1 SV=3)

HSP 1 Score: 256.144 bits (653), Expect = 2.902e-76
Identity = 172/531 (32.39%), Postives = 266/531 (50.09%), Query Frame = 0 
Query:    3 SANEMVKSQKGYAELQKNTIKEREAVNEAQEKIRKGTIGLFSSKAKQEKALSKANERREIAEKRSTSARNDYLLYIAATNAHQMKYYALDLPDLIAVQDGNIYENFKEYYNVITEAEKEVCEQELQNIQVLQEDIEQLQRAHAIQFFLKENPVFTKCIPYDMMPCTGDEVCNISHEFEAGL----ALNKEARKWCNRMVQKQKMIRKKNKQLTKLKQAVSTDNDLNQVAEPPQPEKGEKGEKGEKPKTREEMIEALTEEIRHLEVIRTKAEGRIQALKLAGIDTDNWLQGALTEIGETDDEDENENHPTQIQTGYDYSDEDNDFDAGDWDDPPNENLSVAAYSDDALSITSSDVTRTGTPAVIIYPFEATSPEELTVNDNEEIDFLETLGDG----WCKVRNKSGQVGFVPESYIEVRARGTSVATYATSNQSSTSSPAGSTVSDAWQVSLVPGEQPLPEVEVQQAQSPNYVCYAKAVYDYDACEDEELSFKEGDVIMVTSQEVDDDDGWWEGVLNGKRGVFPSIVVEETT 525
            +  ++ K +K Y E ++       AV E  +   K  + LF S+   +KA  K   RR     ++T ARNDYLL +AA NAHQ +YY  DL +++   DGN+Y++ K+Y    +  E E C+      Q L E+  ++ R + +Q FL+EN VF K  P+   PC  D    +  E E G     +LNKEARKW  R+ ++ K I  + + L  L+   +       V+E  + E              E+ I+   E IR  E+I+ KAE R+  LK  G+  D WL+ A+ ++ E + E+E    P  + +       + D +  +  +   +N+ V    DD+ S  S  +        ++Y ++A+ P+ELT+   EE + LE + DG    W K RNK GQVG+VPE Y++     TS +  +     +       T S++ +  LV G                 VC+ KA+YDY+   D+ELSF EG +I + ++E  DDDG+WEG  NG+ GVFPS++VEE +
Sbjct:  144 TVKDLAKGKKKYFETEQMA----HAVREKADIEAKSKLSLFQSRISLQKASVKLKARRSECNSKATHARNDYLLTLAAANAHQDRYYQTDLVNIMKALDGNVYDHLKDYLIAFSRTELETCQAVQNTFQFLLENSSKVVRDYNLQLFLQENAVFHKPQPFQFQPCDSDTSRQL--ESETGTTEEHSLNKEARKWATRVAREHKNIVHQQRVLNDLECHGAA------VSEQSRAE-------------LEQKIDEARENIRKAEIIKLKAEARLDLLKQIGVSVDTWLKSAMNQVME-ELENERWARPPAVTSNGTLHSLNADTEREE-GEEFEDNMDVF---DDSSSSPSGTLRNYPLTCKVVYSYKASQPDELTI---EEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQF---PTSNSLLSMLQSLAALDSRSHTSSNSTEAELVSGS----------LNGDASVCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEELS 628
The following BLAST results are available for this feature:
BLAST of TCONS_00019525-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCSD22.902e-7632.39F-BAR and double SH3 domains protein 2 OS=Homo sap... [more]
back to top