TCONS_00019506-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019506-protein
Unique NameTCONS_00019506-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019506-protein ID=TCONS_00019506-protein|Name=TCONS_00019506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
MISKMADEEVVPLENDFHVSSDINLEIEGDIRVQGIQSDEEDSTTLDEPI
STTLKRDLNAIGKKFMHVIIPRQSTSLLRDWDLWGPLILCIILASLLQSS
SNEDGSPEFAQVFAIVWLGASVVTFNSKLLGGNISFFQSVCVLGYCVLPL
TLALIACKILLAISDVSTTIFAIRCAVVVASLVWSCFASLAFLGDTQPHN
RKPLAVYPICLFYLFISWMVVSHNG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010966XLOC_010966Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019506TCONS_00019506Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 66..210
e-value: 9.6E-14
score: 51.4

Blast
[Close]
BLAST of TCONS_00019506-protein vs. Swiss-Prot (Human)
Match: YIPF6 (Protein YIPF6 OS=Homo sapiens GN=YIPF6 PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 7.701e-81
Identity = 116/213 (54.46%), Postives = 155/213 (72.77%), Query Frame = 0 
Query:   15 NDFHVSSDINLEIEGDIRVQGIQSDEEDSTTLDEPISTTLKRDLNAIGKKFMHVIIPRQSTSLLRDWDLWGPLILCIILASLLQ---SSSNEDGSPEFAQVFAIVWLGASVVTFNSKLLGGNISFFQSVCVLGYCVLPLTLALIACKILLAISDVSTTIFAIRCAVVVASLVWSCFASLAFLGDTQPHNRKPLAVYPICLFYLFISWMVVSHN 224
            +D  +S DI +E E  I ++  +  E DS+TL+E +  T+ RDL A+GKKFMHV+ PR+S +LLRDWDLWGPLILC+ LA +LQ   + S +DG P+FA+VF IVW GA  +T NSKLLGGNISFFQS+CVLGYC+LPLT+A++ C+++L ++D     F +R  VV+    WS  AS AFL D+QP NR+ LAVYP+ LFY  ISWM+++  
Sbjct:   24 SDISISQDIPVEGEITIPMRS-RIREFDSSTLNESVRNTIMRDLKAVGKKFMHVLYPRKSNTLLRDWDLWGPLILCVTLALMLQRDSADSEKDGGPQFAEVFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTVAMLICRLVL-LADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVISWMILTFT 234
The following BLAST results are available for this feature:
BLAST of TCONS_00019506-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
YIPF67.701e-8154.46Protein YIPF6 OS=Homo sapiens GN=YIPF6 PE=1 SV=2[more]
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