TCONS_00019451-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019451-protein
Unique NameTCONS_00019451-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length640

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019451-protein ID=TCONS_00019451-protein|Name=TCONS_00019451-protein|organism=Clytia hemisphaerica|type=polypeptide|length=640bp
MSVIVRKDSKIMLYCKGADTIIYELLSNQSQPIMEPTQQHLDTFACEGLR
TLCLASKELSQGEFEDWAEEFNEARTSTEDRDEKVFEVYCSIEKDLNLLG
ATAIEDKLQDGVPDAIANLAEANIKIFVLTGDKQETAINIGYSSMLLTEN
MHDVFVVEGDNLQTVHANINKYTDRMNEIQTLEGNAPKIYFSGVNDHESV
PMEDVDENMKDGFALVISGKSLAFALLPEAEQDFLRLALACKAVICCRVT
PLQKALVVELVKKNVKATTLAIGDGANDVSMIKAAHIGVGISGKEGRQAV
LAADYSFAQFRFLERLLLVHGRWSYWRMSKFLNYFFYKNFAFTLVQFWYN
LFTGFSAMTLYDDYFLSVYNVCFTSLPVLAMGIFDQDVNDQKSLSSPKLY
IPGQSNLLFNKKTFALKLFHGVVTSLLLFFIPYGIFKETITSEGLAADLK
TDFAVAIGAILVIIVNLQMALDTSHWLWINHFFIWGSIVFYFIFTFTLYS
EGLFNFAVTWFPNVSAATNTFGSGAFWAAFFITCVVCLFPVVGYRWAMQK
MYPTLGDKIRKGIWKERRSKNLSLLFQRKSRVSLRARPGSHRSAFXHFFI
WGSIVFYFIFTFTLYSEGLFNFAVTWFPNVSAATNTFGSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010935XLOC_010935Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019451TCONS_00019451Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001757P_typ_ATPase
IPR006539P-type_ATPase_IV
IPR032630P_typ_ATPase_c
IPR023299ATPase_P-typ_cyto_domN
IPR023214HAD-like_dom
IPR023298ATPase_P-typ_TM_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000287magnesium ion binding
GO:0004012phospholipid-translocating ATPase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0015914phospholipid transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015914 phospholipid transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004012 phospholipid-translocating ATPase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001757P-type ATPaseTIGRFAMTIGR01494TIGR01494coord: 242..358
e-value: 6.9E-33
score: 111.7
IPR006539P-type ATPase, subfamily IVTIGRFAMTIGR01652TIGR01652coord: 1..560
e-value: 7.8E-192
score: 637.6
IPR032630P-type ATPase, C-terminalPFAMPF16212PhoLip_ATPase_Ccoord: 300..554
e-value: 7.1E-79
score: 265.0
IPR023299P-type ATPase, cytoplasmic domain NGENE3D3.40.1110.10coord: 1..106
e-value: 2.2E-31
score: 108.3
IPR023299P-type ATPase, cytoplasmic domain NSUPERFAMILY81660Metal cation-transporting ATPase, ATP-binding domain Ncoord: 1..112
NoneNo IPR availableGENE3D1.20.1110.10coord: 207..560
e-value: 6.3E-57
score: 192.8
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 92..153
coord: 215..320
IPR023298P-type ATPase, transmembrane domainSUPERFAMILY81665Calcium ATPase, transmembrane domain Mcoord: 321..553

Blast
[Close]
BLAST of TCONS_00019451-protein vs. Swiss-Prot (Human)
Match: AT8B2 (Phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=1 SV=2)

HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0
Identity = 312/606 (51.49%), Postives = 404/606 (66.67%), Query Frame = 0 
Query:    1 MSVIVRK-DSKIMLYCKGADTIIYELLSNQSQPIMEPTQQHLDTFACEGLRTLCLASKELSQGEFEDWAEEFNEARTSTEDRDEKVFEVYCSIEKDLNLLGATAIEDKLQDGVPDAIANLAEANIKIFVLTGDKQETAINIGYSSMLLTENMHDVFVVEGDNLQTVHANINKYTDRMNEIQTLEGNAPKIYFSGVNDHESVPMEDVDENMKDGFALVISGKSLAFALLPEAEQDFLRLALACKAVICCRVTPLQKALVVELVKKNVKATTLAIGDGANDVSMIKAAHIGVGISGKEGRQAVLAADYSFAQFRFLERLLLVHGRWSYWRMSKFLNYFFYKNFAFTLVQFWYNLFTGFSAMTLYDDYFLSVYNVCFTSLPVLAMGIFDQDVNDQKSLSSPKLYIPGQSNLLFNKKTFALKLFHGVVTSLLLFFIPYGIFKETITSEGLAADLKTDFAVAIGAILVIIVNLQMALDTSHWLWINHFFIWGSIVFYFIFTFTLYSEGLFNFAVTWFPNVSAATNTFGSGAFWAAFFITCVVCLFPVVGYRWAMQKMYPTLGDKIRKGIWKERRSKNLSLLFQRKSRVSLRARPG---SHRSAFXHFFIWG 602
            MSVIVR  + KI LYCKGADTI+ + L + +Q ++  T  HL+ +A EGLRTL LA K+L +  +E+WAE   +A  + + R++++  +Y  +E ++ LLGATAIEDKLQ GVP+ IA L  ANIKI+VLTGDKQETA+NIGYS  +LT++M +VF+V G  +  V   + K  ++M +     GN     F+  +   S  +  V E +   +ALVI+G SLA AL  + E +FL  A ACKAVICCRVTPLQKA VVELVKK  KA TLAIGDGANDVSMIK AHIGVGISG+EG QAVLA+DYSF+QF+FL+RLLLVHGRWSY RM KFL YFFYKNFAFT+V FW+  F GFSA T+YD YF+++YN+ +TSLPVLAMG+FDQDV +Q+S+  PKLY PGQ NLLFNK+ F + +  G+ TS+L+FFIPYG+F +    +G        FAV +   LVI+V++Q+ LDT +W  INHFFIWGS+  YF   F ++S GLF+     F  V  A NT      W    +T VVC+ PVV +R+    + P L D +R      ++ K      +R  R   R R G   SH+  F    + G
Sbjct:  563 MSVIVRNPEGKIRLYCKGADTILLDRLHHSTQELLNTTMDHLNEYAGEGLRTLVLAYKDLDEEYYEEWAERRLQASLAQDSREDRLASIYEEVENNMMLLGATAIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFIVTGHTVLEVREELRKAREKMMDSSRSVGNG----FTYQDKLSSSKLTSVLEAVAGEYALVINGHSLAHALEADMELEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGTQLADYQSFAVTVATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVYFAILFAMHSNGLFDMFPNQFRFVGNAQNTLAQPTVWLTIVLTTVVCIMPVVAFRFLRLNLKPDLSDTVRYTQLVRKKQKAQHRCMRRVGRTGSR-RSGYAFSHQEGFGELIMSG 1163
The following BLAST results are available for this feature:
BLAST of TCONS_00019451-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AT8B20.000e+051.49Phospholipid-transporting ATPase ID OS=Homo sapien... [more]
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