TCONS_00019315-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019315-protein
Unique NameTCONS_00019315-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length976

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019315-protein ID=TCONS_00019315-protein|Name=TCONS_00019315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=976bp
QSTIEERSEISQASNYWFGSFLAGHQSSFHFYRKKIKLKKNMKRPASILV
FGMIWLTHIEPSRQNGPDTWSQKPLYIEDTFKRKNYYLTIEEGWQLGKTK
LTFTSLVPHITTTKEARESRLLIHVNGITYCGIKTTSVELALDNLGSSKC
KNFRSGNYLVYDPGSSNMNLCSGSNDEAAFSQNACLSHKIFRIDVDYVPP
QTTSIQLIPTTSDLPESSSPVPTTTVLITSSSIVVIPTSSTQIVLIPTST
TISTTTTPVSSTSIVSSSTTNIPASTTTITTASSTTISSSSASTIPVSST
EVSTIETPETLIAKTEIQTVKDSQIFTTTTPLSQSSTSKDGYSTEILPLV
HLMKTSSNIHIKSTSTPKDSQSTISPSSSTIHQSAQNTSSTTPTPQPPNG
FGQWSLWSSCSATCNGTKQRSRECFDYCYGDSLETEQCGVAQCPIHGGFR
QWTKWSNCTKECNNGLRYRERKCDQPRPQFNGFPCYGVTNETELCNVHLC
PVDAIWSEWSPWSGCDKPCNNGSYIRKRFCTNAMYEGINRCGHEDVQIDK
SSCNQHNCPRTYADMVFSLMLPYQQDYSNKYSEAFRELETKIREQIRSAY
IDVFEENKIYNVILHSAKNGSVVVNLTIEFTSFDSFQFIVLQDSVEVEYA
INKLILKPNQVVQYKIGPDVPITSPKNIRASSEKSSIALTWQMENTSTYN
VTGYIIFYRKSIDQNYLRYGTNETSANITGLSAGMKYVVRILATSRNGNG
IASKAFVVSTVEKLPELPPTDLTSSSLDAFALLLEWTQVEREKMNGEPQG
YVVKVFNAKRKYLFTHRTGALQNYIEVNNLEPNTAYLFEICPQNILGLGP
CDVIMSKTVSSVPTAVPQNLTSSETRSHNYLHINWSPPPESQLYGDLVSY
KIKWSDAQNLVISKGEKTLHPLTTSYKLTNLAPNTKYQIELRAINTVGIG
PAAIVSAETCKCPEKISTSYFLMPPY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010850XLOC_010850Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019315TCONS_00019315Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR000884TSP1_rpt
IPR013783Ig-like_fold
IPR000082SEA_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 668..750
e-value: 4.2E-6
score: 36.3
coord: 766..849
e-value: 0.066
score: 22.3
coord: 863..950
e-value: 1.5E-10
score: 51.1
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 674..751
e-value: 1.1E-8
score: 35.2
coord: 867..951
e-value: 2.3E-15
score: 56.6
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 671..763
score: 16.726
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 768..864
score: 13.57
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 866..965
score: 19.511
IPR003961Fibronectin type IIICDDcd00063FN3coord: 867..959
e-value: 1.75155E-10
score: 58.2767
IPR003961Fibronectin type IIICDDcd00063FN3coord: 768..850
e-value: 7.767E-5
score: 40.9427
IPR003961Fibronectin type IIICDDcd00063FN3coord: 675..760
e-value: 4.05139E-11
score: 59.8175
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 768..952
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 662..768
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 506..559
e-value: 1.4E-6
score: 37.8
coord: 401..444
e-value: 3.0E-6
score: 36.8
coord: 449..501
e-value: 7.2E-11
score: 52.1
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 446..500
e-value: 3.0E-13
score: 49.3
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 403..443
e-value: 2.0E-4
score: 21.4
coord: 451..500
e-value: 5.4E-10
score: 39.2
coord: 507..558
e-value: 2.5E-7
score: 30.7
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 502..559
e-value: 1.2E-10
score: 41.2
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 446..501
score: 11.641
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 398..444
score: 10.592
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 503..559
score: 11.129
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 443..500
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 398..438
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 500..558
NoneNo IPR availableGENE3D2.30.90.10coord: 400..445
e-value: 1.3E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..398
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 760..853
e-value: 3.1E-11
score: 42.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 854..968
e-value: 3.2E-18
score: 65.2
coord: 662..759
e-value: 8.3E-16
score: 57.4
IPR000082SEA domainGENE3D3.30.70.960coord: 568..649
e-value: 1.0E-5
score: 25.1

Blast
[Close]
BLAST of TCONS_00019315-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.616e-32
Identity = 64/171 (37.43%), Postives = 82/171 (47.95%), Query Frame = 0 
Query:  399 NGFGQWSLWSSCSATCN-GTKQRSREC--------FDYCYGDSLETEQCGVAQCPIHGGFRQWTKWSNCTKECNNGLRYRERKCDQPRPQFNGFPCYGVTNETELCNVHLCPVDAIWSEWSPWSGCDKPCNNGSYIRKRFCTNAMYE-GINRCGHEDVQIDKSSCNQHNCP 559
             GF QWS W +CS TC  G ++RSR C           C G  LE   C    CP+ G + +W+ W  CT+ C  G + R R C+ P  Q  G PC G   E  +CN+  CPV   WS W PW  C + C  G+  R R C N     G + C   + Q+    CN+ NCP
Sbjct: 4530 GGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQM--QVCNERNCP 4698

HSP 2 Score: 129.413 bits (324), Expect = 4.633e-30
Identity = 58/166 (34.94%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:  404 WSLWSSCSATCNG-TKQRSRECFD--------YCYGDSLETEQCGVAQCPIHGGFRQWTKWSNCTKECNNGLRYRERKCDQPRPQFNGFPCYGVTNETELCNVHLCPVDAIWSEWSPWSGCDKPCNNGSYIRKRFCTNAM-YEGINRCGHEDVQIDKSSCNQHNCP 559
            W+ WS+CS +C G  +QR+R C D         C G  ++++ C    CP HG +  W+ W  C++ CN G   R R CD P P   G  C G  ++ + CN  +CPVD  W  W  WS C   C  G   RKR C + +  +G   C  +  Q+ +  CN   CP
Sbjct: 4706 WASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTR--CNVQACP 4869

HSP 3 Score: 128.642 bits (322), Expect = 8.547e-30
Identity = 65/176 (36.93%), Postives = 82/176 (46.59%), Query Frame = 0 
Query:  395 PQPPNG-FGQWSLWSSCSATCN-GTKQRSRECFD--------YCYGDSLETEQCGVAQCPIHGGFRQWTKWSNCTKECNNGLRYRERKCDQPRPQFNGFPCYGVTNETELCNVHLCPVDAIWSEWSPWSGCDKPCNNGSYIRKRFCTN-AMYEGINRCGHEDVQIDKSSCNQHNCP 559
            P P +G +  W  W +CS +C  GT+ R+R C +        YC G   + + C    CPIHG +  W  WS C+  C  G R R R C  P PQ+ G  C G   +++ CN   CP    WS WS W  C + CN G   R R C N     G   CG  D QI +  CN   CP
Sbjct: 4639 PCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQR--CNTDMCP 4812

HSP 4 Score: 127.487 bits (319), Expect = 1.604e-29
Identity = 59/176 (33.52%), Postives = 89/176 (50.57%), Query Frame = 0 
Query:  395 PQPPNG-FGQWSLWSSCSATCN-GTKQRSRECFDY--------CYGDSLETEQCGVAQCPIHGGFRQWTKWSNCTKECNNGLRYRERKCDQPRPQFNGFPCYGVTNETELCNVHLCPVDAIWSEWSPWSGCDKPCNNGSYIRKRFCTNAMYE-GINRCGHEDVQIDKSSCNQHNCP 559
            P P +G + +WSLW  C+ +C  G + R+R C +         C G+++E   C +  CP+HG +  W  W  C++ C  G + R R C+ P P F G  C G   + ++CN   CP+   W+ W+ WS C   C  G+  R R C++ + + G  +C   DVQ D   CN   CP
Sbjct: 4582 PCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSD--FCNSDPCP 4755
The following BLAST results are available for this feature:
BLAST of TCONS_00019315-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN12.616e-3237.43Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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