TCONS_00019286-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019286-protein
Unique NameTCONS_00019286-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length435

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019286-protein ID=TCONS_00019286-protein|Name=TCONS_00019286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
MAVYKQRLDQFEECLKQSKIDLKQFQTLCFAGIPDKPSLRSLAWKILLYY
LPRNHDDWDDVLRKQRAIYKNYVEEIVAHPADCKEAKEHVDHPLNMNPDS
QWITYFKDNEVLLQIDRDVRRLCPDISFFQHPTKYPIQTIIDVSSSNQTL
TKRVETCVLDNSVIGTSKGGLSNITIKKYSNEEYVVLPQGQEAHWQVVER
ILFIYAKLNPGISYVQGMNEIIGPIYYTFASDADEKWKAHAEADAFFCFT
AIMAEIRDNFIKTLDDSELGIGQDMNKLYCLLQVKDEEVYDDLSKKGMKP
QFFAFRWITLLLSQEFYLPDVIRLWDSLFADQKRFDFLLYVCLAMLVLIR
DQILEGDFAKTMKIIQNFPHDQYDMATIIRKAVELNSPTALGVPVEKPPA
PASGSVTGKSISARGFSLKQRLVNFARNDNSSNSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010826XLOC_010826Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019286TCONS_00019286Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 31..357
e-value: 2.6E-61
score: 219.7
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 196..354
e-value: 1.9E-33
score: 115.8
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 34..332
score: 32.383
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 270..385
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 193..290
coord: 10..132
NoneNo IPR availableGENE3D1.10.8.270coord: 53..254
e-value: 8.7E-26
score: 89.8

Blast
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BLAST of TCONS_00019286-protein vs. Swiss-Prot (Human)
Match: TBC13 (TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3)

HSP 1 Score: 454.136 bits (1167), Expect = 7.192e-159
Identity = 222/396 (56.06%), Postives = 286/396 (72.22%), Query Frame = 0 
Query:    2 AVYKQRLDQFEECLKQSKIDLKQFQTLCFAGIPDKPSLRSLAWKILLYYLPRNHDDWDDVLRKQRAIYKNYVEEIVAHPADCKE----AKEHV---DHPLNMNPDSQWITYFKDNEVLLQIDRDVRRLCPDISFFQHPTKYPIQTIIDVSSSNQTLTKRVETCVLDNSVIGTSKGGLSNITIKKYSN-----EEYVVLPQGQEAHWQVVERILFIYAKLNPGISYVQGMNEIIGPIYYTFASDADEKWKAHAEADAFFCFTAIMAEIRDNFIKTLDDSELGIGQDMNKLYCLLQVKDEEVYDDLSKKGMKPQFFAFRWITLLLSQEFYLPDVIRLWDSLFADQKRFDFLLYVCLAMLVLIRDQILEGDFAKTMKIIQNFPHDQYDMATIIRKAVEL 385
            +++K R+  F++ LK+  I L++ + L F+GIP +  LR L WKILL YLP     W  +L KQR +Y  ++ E++  P   K     ++E V   DHPLN NPDS+W TYFKDNEVLLQID+DVRRLCPDISFFQ  T YP   I+D  +  +TL KRVE   L +  +  ++ G++N++    ++      EY VLP G EAHW+VVERILFIYAKLNPGI+YVQGMNEI+GP+YYTFA+D + +WK HAEAD FFCFT +MAEIRDNFIK+LDDS+ GI   M K+Y  L+ KD E+Y  L ++ +KPQFFAFRW+TLLLSQEF LPDVIR+WDSLFAD  RFDFLL VC AML+LIR+Q+LEGDF   M+++Q++P    D+  I++KA EL
Sbjct:    3 SLHKSRIADFQDVLKEPSIALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRELYAQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFFQRATDYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPHKNSVPSSLNEYEVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDNRFDFLLLVCCAMLMLIREQLLEGDFTVNMRLLQDYPIT--DVCQILQKAKEL 396
The following BLAST results are available for this feature:
BLAST of TCONS_00019286-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBC137.192e-15956.06TBC1 domain family member 13 OS=Homo sapiens GN=TB... [more]
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