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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00019222-protein ID=TCONS_00019222-protein|Name=TCONS_00019222-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1776bp
MEKDNLSKNLFETFEKVNDDEKDKNFAKPAPIQPAKKEPMQVVLRIKPFT
DKDLNQKENRGCVVLKENGKVELRAPQDSFQFKSSIRGLADQTHEFSFSR
VFDQKTQQKELFDEIMLPFAKDILDGQNGLVFTYGVTNSGKTYTIQGNPN
DGGVLPRALDVIFNSISKKLYTRPNLKPKHCQSVVSLTEDEEQIEELVRK
SVLSAGQEKENLKLSKLLNSTSKSGCGSASSSANSTILSNISMISSSKQS
AIDEAELAEEIRARVMDATEISVEQQGNVKFGVWVSFMEIYNELIYDLLD
LTPIGKGRKRPALKLGDDRNGKPYVKGLKTIFVTSSDEAYKVLRLGQNNR
HMAATKLNQQSSRSHCIFDIKLLKIVDVGQPHVARISRLSIVDLAGSERY
CKTGAEGDLLKQAGNINASIMTLGKCISTLRYNQEHPNHQTIIPFRESKL
TRLFQNFFLGKGKASMIVNISQCASVFDETYHVLKFSAVAKQIKMKAERA
TEFWKAPIMPKTPAATPSNKRPPLTIVTPATSKKRTLENPAEFSFNELVN
IVSELRDKVKKERVEKANLERNIRKEVCQEMNELMVEIESSHSEQMMEQK
QHLESMMDQRINLLTKVVNKRKRKAEDSIETSAEISLACLNAEKVKVKER
DETILTLQSKVRQLEAEHTFLKRPETPEDRHKQLDALTDDLKQTKETVAL
QNEDIERMQNLLQNKDDEIDKLREALDEEEEGDTNTMKELQVLLETTIKE
LDSARIKLDNRDIRIKELEKIIESQKEDNLEVVKMAEKANEWHTLQKEKN
ETLKKTNTEQQSRIEELENEVKSLEKRLQEKSEMYEEADENLKTVQFEND
EISIKLETYKTAMQEHQTALNDNETFIEQLNKEVAELNDKLKSFENSESV
AAAAEDEKIVVKEEPKNESVKLKEDLVKAELKVQEYGDKITRLEKQMHCY
ESAQEKPTPVKSAVMKLNPSVSKTPDHKMPASPFKQTPVSKIANTPNKGS
PYSPASKVSHQQTIKKLNKLLEETSKALEKKTALVVTKNNRVTQLEAQVS
SLEKKTAIKDLKAEKSGLESQVSKLEQENVELSDVKNKLESKLSSEEENT
ASLNEEIDSLESKIEQLQSDLNQAVKEKEIAGRRHEDEMRHHCVLLNQAN
ESSESSSRRIDELGEQVNKADTLIGELRTSLEKQQTQLQTEQQKWRSELS
QKTLELKEAQTKMEDDRKTIKELTNDKERVKNSTNKLQKQLDDRRKSRVC
LNTQFSTTLEGYEQRLKDVHDQVDDLEEEKSLCKQKIQELESEIEKLQRE
PSELASLKTREMEFLQQIHTLEETCSKHEIESQTYSLKNTKLEMRIQALE
SEQNGTSEKLIEMEKENKSLSDIVRELSEKLKAACVEKINLEQAKLNLEI
ESEKQFKSILSLEKQKSETDAILDSYKENVNALDEKKKEMSSLEKTLADK
DQSIQELRMKINEQEASDKSHSDLLKENIELKESLKFAENEKDRILEEKK
TALDELLKLSVKSDHHASVTRSSSRKRITSAPVLEHAVDDYTPKRSKRNV
EEKPVTRRLTRSARKCKVVVEPVDVANVSHHEENKENEPVNQSMDNTSER
TTKSATRRGAVEKRTKEQAEQKVLQEEPEDEEEDDDDYVCCVSIALSPFS
TIEENEEEEDESVEMAEECTEDEDEDENFEFIDVEPDQYVALEQHGEYQS
MPIIGKVVEVVPKYVQLQMMQGGYSKQWKPESDEESDELITRKIHRKYIL
CNNVRFTNARRLPIETKRNLQKLYLN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003777 | microtubule motor activity |
| GO:0008017 | microtubule binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007018 | microtubule-based movement |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007018 |
microtubule-based movement |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0008017 |
microtubule binding |
| molecular_function |
GO:0003777 |
microtubule motor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1423..1467 |
| None | No IPR available | COILS | Coil | Coil | coord: 1174..1240 |
| None | No IPR available | COILS | Coil | Coil | coord: 800..848 |
| None | No IPR available | COILS | Coil | Coil | coord: 1655..1675 |
| None | No IPR available | COILS | Coil | Coil | coord: 1058..1134 |
| None | No IPR available | COILS | Coil | Coil | coord: 1471..1505 |
| None | No IPR available | COILS | Coil | Coil | coord: 1332..1394 |
| None | No IPR available | COILS | Coil | Coil | coord: 1007..1055 |
| None | No IPR available | COILS | Coil | Coil | coord: 647..667 |
| None | No IPR available | COILS | Coil | Coil | coord: 1259..1307 |
| None | No IPR available | COILS | Coil | Coil | coord: 684..732 |
| None | No IPR available | COILS | Coil | Coil | coord: 737..778 |
| None | No IPR available | COILS | Coil | Coil | coord: 926..953 |
| None | No IPR available | COILS | Coil | Coil | coord: 552..579 |
| None | No IPR available | COILS | Coil | Coil | coord: 1146..1166 |
| None | No IPR available | COILS | Coil | Coil | coord: 863..897 |
| None | No IPR available | GENE3D | 1.20.5.340 | | coord: 1314..1415
e-value: 0.18
score: 11.1 |
| None | No IPR available | GENE3D | 1.20.5.1000 | | coord: 1251..1313
e-value: 0.0043
score: 16.5 |
| None | No IPR available | GENE3D | 1.20.5.50 | | coord: 989..1133
e-value: 7.8E-10
score: 38.1
coord: 1145..1250
e-value: 0.0011
score: 18.2 |
| None | No IPR available | GENE3D | 1.10.287.620 | | coord: 641..796
e-value: 0.004
score: 16.1 |
| None | No IPR available | GENE3D | 1.20.120.330 | | coord: 797..950
e-value: 4.6E-6
score: 25.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1512..1558 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 971..1010 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1575..1636 |
| IPR001752 | Kinesin motor domain | PRINTS | PR00380 | KINESINHEAVY | coord: 355..372
score: 52.5
coord: 443..464
score: 45.11
coord: 126..147
score: 56.06
coord: 388..406
score: 57.85 |
| IPR001752 | Kinesin motor domain | SMART | SM00129 | kinesin_4 | coord: 37..501
e-value: 1.1E-113
score: 393.7 |
| IPR001752 | Kinesin motor domain | PFAM | PF00225 | Kinesin | coord: 45..493
e-value: 2.1E-97
score: 325.9 |
| IPR001752 | Kinesin motor domain | GENE3D | 3.40.850.10 | | coord: 32..505
e-value: 2.5E-107
score: 358.1 |
| IPR001752 | Kinesin motor domain | PROSITE | PS50067 | KINESIN_MOTOR_2 | coord: 39..493
score: 99.815 |
| IPR019821 | Kinesin motor domain, conserved site | PROSITE | PS00411 | KINESIN_MOTOR_1 | coord: 387..398 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 40..169
coord: 276..500 |
Blast
BLAST of TCONS_00019222-protein vs. Swiss-Prot (Human)
Match: KI20A (Kinesin-like protein KIF20A OS=Homo sapiens GN=KIF20A PE=1 SV=1) HSP 1 Score: 427.172 bits (1097), Expect = 4.134e-129 Identity = 243/588 (41.33%), Postives = 360/588 (61.22%), Query Frame = 0
Query: 38 EPMQVVLRIKPFTDKDLNQKENRGCVVLKENGKVELRAPQDSFQFKSSIRGLADQTHEFSFSRVFDQKTQQKELFDEIMLPFAKDILDGQNGLVFTYGVTNSGKTYTIQGNPNDGGVLPRALDVIFNSISKKLYTRPNLKPKHCQSVVSLTEDEEQIEELVRKSVLSAGQEKENLKLSKLLNSTSKSGCGSASSSANSTILSNISMISSSKQSAIDEAELAEEIRARVMDATEISVEQQGNVKFGVWVSFMEIYNELIYDLLDLTPIGKGRKRPALKLGDDRNGKPYVKGLKTIFVTSSDEAYKVLRLGQNNRHMAATKLNQQSSRSHCIFDIKLLKIVDVGQPHVARISRLSIVDLAGSERYCKTGAEGDLLKQAGNINASIMTLGKCISTLRYNQEHPNHQTIIPFRESKLTRLFQNFFLGKGKASMIVNISQCASVFDETYHVLKFSAVAKQIKMKAERATEFWKAPIMPKTPAATPSNKRPPLTIVTPATSKKRT--------LENPAEFSFN---ELVNIVSELRDKVKKERVEKANLERNIRKEVCQEMNELMVEIESSHSEQMMEQKQHLESMMDQRINLL 614
E ++V LR++P +L ++E++GCV ++ + L+AP+DSF KS+ RG+ TH F+FS++F + Q F+ + KD+L GQN L++TYGVTNSGKT+TIQG DGG+LPR+L +IFNS+ +L+ P+LKP V+ L + + EE+ + S+L+ G ++E L S + +S G+ S+S +S I S+ + S +DE R D + V N++F +W+SF EIYNEL+YDLL+ P + RKR L+L +D+NG PYVK L I V ++EA+K+L++G+ N+ A+T LNQ SSRSH IF I++L + G V +IS LS+ DLAGSER CK G+ LK+AGNIN S+ TLG+CI+ LR NQ++ + Q ++PFR+SKLTR+FQ FF G+G++ MIVN++ CAS +DET HV KFSA+A Q+ P+ P+ K L V+P+ K +EN A+ S EL+ +V ++ + KER EK LE ++R E+C EM E M + E SE + QK+ LE M ++++N+L
Sbjct: 63 EKVKVYLRVRPLLPSELERQEDQGCVRIENVETLVLQAPKDSFALKSNERGIGQATHRFTFSQIFGPEVGQASFFNLTVKEMVKDVLKGQNWLIYTYGVTNSGKTHTIQGTIKDGGILPRSLALIFNSLQGQLHPTPDLKPLLSNEVIWLDSKQIRQEEMKKLSLLNGGLQEEELSTSLKRSVYIESRIGT-STSFDSGIAGLSSISQCTSSSQLDETSH----RWAQPDTAPLPVP--ANIRFSIWISFFEIYNELLYDLLE--PPSQQRKRQTLRLCEDQNGNPYVKDLNWIHVQDAEEAWKLLKVGRKNQSFASTHLNQNSSRSHSIFSIRILHLQGEGDI-VPKISELSLCDLAGSER-CKDQKSGERLKEAGNINTSLHTLGRCIAALRQNQQNRSKQNLVPFRDSKLTRVFQGFFTGRGRSCMIVNVNPCASTYDETLHVAKFSAIASQL---------VHAPPMQLGFPSLHSFIKEHSLQ-VSPSLEKGAKADTGLDDDIENEADISMYGKEELLQVVEAMKTLLLKERQEKLQLEMHLRDEICNEMVEQMQQREQWCSEHLDTQKELLEEMYEEKLNIL 629
The following BLAST results are available for this feature:
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