TCONS_00019116-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019116-protein
Unique NameTCONS_00019116-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length356

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019116-protein ID=TCONS_00019116-protein|Name=TCONS_00019116-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
MQKAKKYDWKDSNMALFGSDTEKKVKKESAESEPAWQGAGEDVGLKIWRI
VKFQVEHWEDDQYGEFYNGDSYIILNTYKEPEGDELKHDVHFWIGKYSTQ
DEYGTAAYKTVELDTFLDDKPVQHREVQGHESSLFKSYFDSLTLLKGGAD
TGFKRVLPEAYEPRLFHVKKENRKIKCTQVSLKRGNLTSDDVFIIDNGLN
IYQWNGSKCSADEKFKAAQEVDKIEGKRKGCKTHTVEERSCSDNHPAVQI
LGPGKSKDKAEDPQGEKKVLKIKDGEDVEEVSSGDDISKDALQSDDVYIV
NTGDHVYCWVGKGASVDERKNGIPYACNYLSKTETPWLPVSVVAEGAEPK
DVAFFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010719XLOC_010719Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019116TCONS_00019116Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007122Villin/Gelsolin
IPR029006ADF-H/Gelsolin-like_dom
IPR007123Gelsolin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0051015actin filament binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0051015 actin filament binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007122Villin/GelsolinPRINTSPR00597GELSOLINcoord: 62..78
score: 52.41
coord: 289..311
score: 36.96
coord: 122..142
score: 35.28
coord: 175..195
score: 30.74
IPR007122Villin/GelsolinSMARTSM00262VILL_6coord: 161..254
e-value: 1.5E-12
score: 57.7
coord: 43..142
e-value: 1.6E-22
score: 90.8
coord: 265..356
e-value: 4.9E-4
score: 29.4
IPR029006ADF-H/Gelsolin-like domainGENE3D3.40.20.10coord: 27..153
e-value: 3.4E-30
score: 103.9
IPR029006ADF-H/Gelsolin-like domainGENE3D3.40.20.10coord: 250..355
e-value: 1.5E-14
score: 53.3
IPR029006ADF-H/Gelsolin-like domainGENE3D3.40.20.10coord: 160..249
e-value: 1.9E-17
score: 62.8
IPR007123Gelsolin-like domainPFAMPF00626Gelsolincoord: 63..135
e-value: 2.7E-14
score: 52.7
coord: 285..349
e-value: 1.1E-7
score: 31.5
coord: 178..230
e-value: 7.9E-11
score: 41.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..268
NoneNo IPR availableCDDcd11290gelsolin_S1_likecoord: 36..149
e-value: 6.13912E-54
score: 174.334
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 33..171
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 262..349
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 149..237

Blast
[Close]
BLAST of TCONS_00019116-protein vs. Swiss-Prot (Human)
Match: GELS (Gelsolin OS=Homo sapiens GN=GSN PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.530e-55
Identity = 125/333 (37.54%), Postives = 189/333 (56.76%), Query Frame = 0 
Query:   34 PAWQGAGEDVGLKIWRIVKFQVEHWEDDQYGEFYNGDSYIILNTYKEPEGDELKHDVHFWIGKYSTQDEYGTAAYKTVELDTFLDDKPVQHREVQGHESSLFKSYFDS-LTLLKGGADTGFKRVLP-EAYEPRLFHVKKENRKIKCTQVSLKRGNLTSDDVFIIDNGLNIYQWNGSKCSADEKFKAAQEVDKI-EGKRKG-CKTHTVEERSCSDNHPAVQILGP------GKSKDKAEDPQGEK--KVLKIKDGEDVEEVSSGDD---ISKDALQSDDVYIVNTG--DHVYCWVGKGASVDERKNGIPYACNYLSKTETP-WLPVSVVAEGAE 348
            P +  AG++ GL+IWR+ KF +     + YG+F+ GD+Y+IL T +   G+ L++D+H+W+G   +QDE G AA  TV+LD +L+ + VQHREVQG ES+ F  YF S L   KGG  +GFK V+P E    RLF VK   R ++ T+V +   +  + D FI+D G NI+QW GS  +  E+ KA Q    I + +R G  + H  EE   ++    +Q+LGP      G      ED    K  K+ K+ +G     VS   D    ++ AL+S+D +I++ G    ++ W GK A+ +ERK  +  A ++++K + P    VSV+ EG E
Sbjct:   57 PEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGN-LQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLFQVKGR-RVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEE--GTEPEAMLQVLGPKPALPAGTEDTAKEDAANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQANTEERKAALKTASDFITKMDYPKQTQVSVLPEGGE 385

HSP 2 Score: 116.316 bits (290), Expect = 2.206e-28
Identity = 99/319 (31.03%), Postives = 145/319 (45.45%), Query Frame = 0 
Query:   46 KIWRIVKFQVEHWEDDQYGEFYNGDSYIILNTYKEPEGDELKHDVHFWIGKYSTQDEYGTAAYKTVELDTFLDDKPVQHREVQGHESSLFKSYFDS--LTLLKGGADTGFKRVLPEAYEPRLFHVKKENR-KIKCTQVSLKRGNLTSDDVFIIDNGLNIYQWNGSKCSADEKFKAAQEVDKIEGKRKGCKTHTVEERSCSDNHPAVQILGPGKS--------KDKAEDPQGEKK-VLKIKDGEDVEEVSSGDDISKDALQSDDVYIVNTGDHVYCWVGKGASVDERKNGIPYACNYL---SKTETPWLPVSVVAEGAEP 349
            +IWRI        +   YG+FY GDSYIIL  Y+   G      ++ W G  STQDE   +A  T +LD  L   PVQ R VQG E +   S F    + + KGG      +  P +   RLF V+  +    +  +V  K G L S+D F++      Y W G+  S  EK   AQE+ ++       +   V+    S+     + LG GK+        KDK  D    +      K G  V E   G+ + +D L +DDV +++T D V+ WVGK +  +E+   +  A  Y+           P++VV +G EP
Sbjct:  448 QIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRH--GGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPAST--RLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEK-TGAQELLRV------LRAQPVQVAEGSEPDGFWEALG-GKAAYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEVPGELMQED-LATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVKQGFEP 753
The following BLAST results are available for this feature:
BLAST of TCONS_00019116-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GELS2.530e-5537.54Gelsolin OS=Homo sapiens GN=GSN PE=1 SV=1[more]
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