TCONS_00019098-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019098-protein
Unique NameTCONS_00019098-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019098-protein ID=TCONS_00019098-protein|Name=TCONS_00019098-protein|organism=Clytia hemisphaerica|type=polypeptide|length=143bp
RWTFFCLIRDRKFIASNTMENKVTIVLRLIRSFEHRTIRNVVYHDIDLDL
LTSEFINFVKTDLKTKTSLPPPFRTFKYDTMKVQHKAFGSKTSDPVINTF
NDDELILNMEKSLRDNGIVNETEISFFVLDDYRKYQKNPQIAW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010711XLOC_010711Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019098TCONS_00019098Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018794UPF0538
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018794Uncharacterised protein family UPF0538PFAMPF10209DUF2340coord: 25..143
e-value: 9.2E-40
score: 135.7

Blast
[Close]
BLAST of TCONS_00019098-protein vs. Swiss-Prot (Human)
Match: CB076 (UPF0538 protein C2orf76 OS=Homo sapiens GN=C2orf76 PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 3.775e-40
Identity = 59/123 (47.97%), Postives = 88/123 (71.54%), Query Frame = 0 
Query:   21 NKVTIVLRLIRSFEHRTIRNVVYHDIDLDLLTSEFINFVKTDLKTKTSLPPPFRTFKYDTMKVQHKAFGSKTSDPVINTFNDDELILNMEKSLRDNGIVNETEISFFVLDDYRKYQKNPQIAW 143
             +VTI +RLIRSFEHR  + VVYH ++LD    EFI F+K D+  +T+LPPPFR +KYD +K+ H+A  SKT++ V++  +D+ L+L  + +L+  GI +ETEI+FF  +DY+ Y+ NP  +W
Sbjct:    4 GEVTITVRLIRSFEHRNFKPVVYHGVNLDQTVKEFIVFLKQDIPLRTNLPPPFRNYKYDALKIIHQAHKSKTNELVLSLEDDERLLLKEDSTLKAAGIASETEIAFFCEEDYKNYKANPISSW 126
The following BLAST results are available for this feature:
BLAST of TCONS_00019098-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CB0763.775e-4047.97UPF0538 protein C2orf76 OS=Homo sapiens GN=C2orf76... [more]
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