TCONS_00019092-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019092-protein
Unique NameTCONS_00019092-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length770

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019092-protein ID=TCONS_00019092-protein|Name=TCONS_00019092-protein|organism=Clytia hemisphaerica|type=polypeptide|length=770bp
MVRLVDRSILLILTYLLVKVDSITIHVNTTLRLSGGNSSFEGNVEILYKG
QWKYVCDDYWDIRDAKVVCRQLGYAKAIIATRGSYYPISHNSSYWLDNVQ
CWGSEPDIDACKHRSYGSHNCKHGTELAGVVCTDVTDVDVKKPVPSKASG
KEVEDTKLRLVGPSKHGFISEGFLEIKVDGVWGGVCADKWTGIESFVACG
NLGYPDTMDSKIAVPDEVQREIYEEKLTHYWMSRVYCDGKESTLYECQHA
GWKKHTCKSKPVYLTCKRSPFINGSRFDKVEMNNHNIRFRSGSRHSEGRV
EIRHEGRWGTICDDGWDITDANVACRQMGFGSAFEAIHYAGFGHGVGKVW
LDQVICNGTEKNIHNCSHLGWGVGDCGHPEDAGVKCYFPYTSDQEEGKLR
VTGGPHSHLGRLEVFSDGVWQGICGMGFGPREAEVACRQAGLGYAVRGFS
TSKHGLNRRKGLYNIKCSGDELRLQYCHHETDKTGRCRYYEMASVECSRY
APDIVMDYREMKRSMRIESRPFNELTCAFEEKCLSSSANNHYWYQAYGHD
MQRTLIRFTSRFWNRGTADYRPDVHKDRWEWHDCHAHYHSMERFADYDLV
DRNGRKRSEGQKASFCLEDSKCDHSVAKRYNCTGKADQGISVGCADNYKF
NIDCQWIDVTGLQYGEYTLRVIVNPIRKALESDYLNNVVVCKINMKSQTD
ITVEECKLDDECLQLSHGGTADGACCKFPFLYKGKEYRSCTTKGTEKFKK
QFQWCSVTTDYDKDKMWGLC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010707XLOC_010707Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019092TCONS_00019092Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001695Lysyl_oxidase
IPR001190SRCR
IPR000562FN_type2_col-bd
IPR017448SRCR-like_dom
IPR019828Lysyl_oxidase_CS
IPR013806Kringle-like
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016641oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0005507copper ion binding
GO:0005044scavenger receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016020 membrane
molecular_function GO:0005507 copper ion binding
molecular_function GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
molecular_function GO:0005044 scavenger receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001695Lysyl oxidasePRINTSPR00074LYSYLOXIDASEcoord: 631..653
score: 39.13
coord: 583..603
score: 59.52
coord: 674..691
score: 59.72
coord: 654..673
score: 57.5
coord: 511..535
score: 32.0
IPR001695Lysyl oxidasePFAMPF01186Lysyl_oxidasecoord: 502..707
e-value: 4.5E-77
score: 258.2
NoneNo IPR availablePRINTSPR00013FNTYPEIIcoord: 723..732
score: 58.27
coord: 754..769
score: 50.42
coord: 734..746
score: 44.41
NoneNo IPR availableGENE3D1.20.5.950coord: 28..77
e-value: 1.3E-17
score: 62.6
coord: 284..335
e-value: 2.5E-20
score: 71.3
NoneNo IPR availableGENE3D4.10.790.10coord: 78..132
e-value: 2.8E-16
score: 59.0
coord: 336..386
e-value: 3.1E-19
score: 68.5
IPR001190SRCR domainPRINTSPR00258SPERACTRCPTRcoord: 306..317
score: 75.16
coord: 321..331
score: 57.29
coord: 287..303
score: 42.84
coord: 352..366
score: 42.52
coord: 375..387
score: 62.55
IPR001190SRCR domainPFAMPF00530SRCRcoord: 291..386
e-value: 2.1E-28
score: 98.6
coord: 35..132
e-value: 6.5E-28
score: 97.1
coord: 403..498
e-value: 2.0E-16
score: 60.2
coord: 170..267
e-value: 4.0E-19
score: 68.9
IPR001190SRCR domainPROSITEPS00420SRCR_1coord: 36..73
IPR001190SRCR domainPROSITEPS00420SRCR_1coord: 292..329
IPR001190SRCR domainPROSITEPS50287SRCR_2coord: 287..387
score: 31.019
IPR001190SRCR domainPROSITEPS50287SRCR_2coord: 31..133
score: 28.649
IPR001190SRCR domainPROSITEPS50287SRCR_2coord: 399..498
score: 19.869
IPR001190SRCR domainPROSITEPS50287SRCR_2coord: 158..267
score: 20.951
IPR000562Fibronectin, type II, collagen-bindingSMARTSM00059FN2_2coord: 719..770
e-value: 1.0E-15
score: 68.2
IPR000562Fibronectin, type II, collagen-bindingPFAMPF00040fn2coord: 726..770
e-value: 9.3E-14
score: 51.3
IPR000562Fibronectin, type II, collagen-bindingGENE3D2.10.10.10coord: 715..770
e-value: 1.3E-16
score: 59.8
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 721..770
score: 18.493
IPR000562Fibronectin, type II, collagen-bindingCDDcd00062FN2coord: 720..770
e-value: 7.57293E-14
score: 66.175
IPR017448SRCR-like domainSMARTSM00202SR_3coord: 287..387
e-value: 1.6E-47
score: 173.8
coord: 158..267
e-value: 1.4E-14
score: 64.4
coord: 399..498
e-value: 4.3E-22
score: 89.4
coord: 31..133
e-value: 1.8E-49
score: 180.4
IPR017448SRCR-like domainGENE3D3.10.250.10coord: 393..498
e-value: 7.2E-21
score: 74.1
coord: 152..267
e-value: 5.9E-21
score: 74.3
IPR017448SRCR-like domainSUPERFAMILY56487SRCR-likecoord: 396..505
IPR017448SRCR-like domainSUPERFAMILY56487SRCR-likecoord: 284..387
IPR017448SRCR-like domainSUPERFAMILY56487SRCR-likecoord: 30..136
IPR017448SRCR-like domainSUPERFAMILY56487SRCR-likecoord: 156..268
IPR019828Lysyl oxidase, conserved sitePROSITEPS00926LYSYL_OXIDASEcoord: 579..592
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 717..770

Blast
[Close]
BLAST of TCONS_00019092-protein vs. Swiss-Prot (Human)
Match: LOXL2 (Lysyl oxidase homolog 2 OS=Homo sapiens GN=LOXL2 PE=1 SV=1)

HSP 1 Score: 443.351 bits (1139), Expect = 1.042e-144
Identity = 267/694 (38.47%), Postives = 380/694 (54.76%), Query Frame = 0 
Query:   31 LRLSGGNSSF-EGNVEILYKGQWKYVCDDYWDIRDAKVVCRQLGYAKAIIATRGSYYPISHNSSYWLDNVQCWGSEPDIDACKHRSYGSHNCKHGTELAGVVCTD--VTDVDVKKPVPSKASGK--EVEDTKLRLVGPS--KHGFISEGFLEIKVDGVWGGVCADKWTGIESFVACGNLGYPD--TMDSKIAVPDEVQREIYEEKLTHYWMSRVYCDGKESTLYECQHAG------WKKHTCKSK-PVYLTCKRSPFING---SRFDKV-EMNNHNIRFRSGSRHSEGRVEIRHEGRWGTICDDGWDITDANVACRQMGFGSAFEAIHYAGFGHGVGKVWLDQVICNGTEKNIHNCSHLGWGVGDCGHPEDAGVKCYFPYTSDQEEGKLRVTGGPHSHLGRLEVFSDG----VWQGICGMGFGPREAEVACRQAGLGYAVRGFSTSK--HG-LNRRKGLYN-IKCSGDELRLQYCHHETDKT----GRCRYYEMASVECSRYAPDIVMDYREMKRSMRIESRPFNELTCAFEEKCLSSSANNHYWYQAYGHDMQRTLIRFTSRFWNRGTADYRPDVHKDRWEWHDCHAHYHSMERFADYDLVDRNGRKRSEGQKASFCLEDSKCDHSVAKRYNCTGKADQGISVGCADNYKFNIDCQWIDVTGLQYGEYTLRVIVNPIRKALESDYLNNVVVCK 692
            LRL+G      EG VE+ Y GQW  VCDD + I  A VVCR+LGY +A   T  S Y        WLDN+ C G+E  + AC    +G  +CKH TE  GVVC+D  +        + ++      +VED ++R +  +  K   + EG++E+K    W  +C   WT   S V CG  G+P   T ++K      V +     +   YW   + C G E+ +  C+          K  TC++  P  ++C      +    SRF K  +     +R R G+   EGRVE+   G WGT+CDD WD+  A+V CR++GFGSA EA+  +  G G+G + L+++ C G EK+I +C       G C H EDAGV+C  P    Q+  KLR+ GG + + GR+EV  +     VW  +CG  +G  EA V CRQ GLG+A   F  +   HG +N  K + + +KCSG EL L +C H+ +      G  +Y   A V CS  APD+V++   ++++  +E RP   L CA EE CLS+SA        Y     R L+RF+S+  N G +D+RP   +  W WHDCH HYHSME F  YDL++ NG K +EG KASFCLED++C+  + K Y C    DQGI++GC D Y+ +IDCQW+D+T +  G+Y  +V++NP  +  ESDY NN++ C+
Sbjct:   58 LRLAGQKRKHSEGRVEVYYDGQWGTVCDDDFSIHAAHVVCRELGYVEAKSWTASSSYG-KGEGPIWLDNLHCTGNEATLAACTSNGWGVTDCKH-TEDVGVVCSDKRIPGFKFDNSLINQIENLNIQVEDIRIRAILSTYRKRTPVMEGYVEVKEGKTWKQICDKHWTAKNSRVVCGMFGFPGERTYNTK------VYKMFASRRKQRYWPFSMDCTGTEAHISSCKLGPQVSLDPMKNVTCENGLPAVVSCVPGQVFSPDGPSRFRKAYKPEQPLVRLRGGAYIGEGRVEVLKNGEWGTVCDDKWDLVSASVVCRELGFGSAKEAVTGSRLGQGIGPIHLNEIQCTGNEKSIIDCKFNAESQG-CNHEEDAGVRCNTPAMGLQK--KLRLNGGRNPYEGRVEVLVERNGSLVWGMVCGQNWGIVEAMVVCRQLGLGFASNAFQETWYWHGDVNSNKVVMSGVKCSGTELSLAHCRHDGEDVACPQGGVQY--GAGVACSETAPDLVLNAEMVQQTTYLEDRPMFMLQCAMEENCLSASAAQTDPTTGY-----RRLLRFSSQIHNNGQSDFRPKNGRHAWIWHDCHRHYHSMEVFTHYDLLNLNGTKVAEGHKASFCLEDTECEGDIQKNYECANFGDQGITMGCWDMYRHDIDCQWVDITDVPPGDYLFQVVINPNFEVAESDYSNNIMKCR 733
The following BLAST results are available for this feature:
BLAST of TCONS_00019092-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOXL21.042e-14438.47Lysyl oxidase homolog 2 OS=Homo sapiens GN=LOXL2 P... [more]
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