TCONS_00019037-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019037-protein
Unique NameTCONS_00019037-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1153

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019037-protein ID=TCONS_00019037-protein|Name=TCONS_00019037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1153bp
MSNLLLLLLATILAICTNVTESSNSLTTSFTGKQYIEYKIPARIDATSKD
KITLKFRTIDASGVLLYSCGEEGDFLLLEMKRGKLVYTGNFGSAGDTNDG
VHQIIINKQYNDGKWHEVTLLRKEEEGETDDDPFQIFIHITVDDSTISKK
PDGAFKQLNLDQSFLVGGLGNRQRLDRTCLDLNNRRNFTGCLQDVHFNSV
NLLYGAKEMFRQFKVHGGTLPFTCTLDYEIIGFHHEQSTLVAKRNILKKN
ELKIAIQLRTFEPNGHIFTHKSTDGSAVLGLVKGKLQLTLSFLSLTQNDA
ATVKSNIKLDDGDWHNVEVTIKRNESEIFLNVDHEKKRFKFPDHFELIEQ
FGLLSSEVRFGGSTLQLPGLVSCFRKIQVDGAELSLKTGKNIKENSQKLI
SNVCQIRDLCFPSPCQHGSTCTQFRGNYQCNCAGTGYQGRQCQTCVYKRT
CEEYKVAGETKSGNYKICPKNEHIFNVYCDMKSGATIMKHSLKNDTQVSK
GDQYDGGDHYYHSVNYQTSLDNIKEIVNVSLTCRQYIRYDCFKSHLLYGI
GRLRAVHFKGARWVDKDSIIQHYWGGATPDSRKCACAMDGSCAQDANGYQ
HDCNCDVFDSTWRHDDGFITDKNRLPVLEMQFSKGKETDGKSFFTVGALK
CYGTVRKPTQPPTTVKTDATVPTLKPIIIDGTMFFNTSEGKIPAKPILIN
GQYFVNNSGVLIPLPNLNNVTIKTEAAQIPSDTIASLFSKPWLVSLIIIG
SILCLLLVFMLYLLFRKNVYGIFMKCVYGNHATKPRIEIEDYNRYSTATE
EESDWDIYRLSTTFPTSTPEPSYGPTDDESVTMRVRTLEDVRGKRRFKRL
TGWGSRTASAPTVVGSLSKYSISEKDESICFPNPEAKALPNDYETKLSSE
NNYEYVESERAYSTTATDGECDSVIDDSVSEFSQKSSHHSNDSSMKESEC
SSQAPMRPNSRATDTSKNSGDVERPNRIGFQNADPNQSQQRPNGIHPIKM
NGSTNREPVKAYYPVLPFNGYRQPAVRRAHPNDYGSHLAMVNNNGNRCPR
FVAVNNRRQSSGNEAYSNMIHQTIQERDELSEEEIQAQYENPRNSDGFYE
LYDHGDNGSPGSETRLLFDDASSREECVREADEQIKLLKKKVIEKATSAD
ECT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010668XLOC_010668Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019037TCONS_00019037Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001791Laminin_G
IPR001881EGF-like_Ca-bd_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR013320ConA-like_dom
IPR002181Fibrinogen_a/b/g_C_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1063..1083
NoneNo IPR availableGENE3D2.60.120.200coord: 231..408
e-value: 3.9E-16
score: 59.0
NoneNo IPR availableGENE3D2.60.120.200coord: 16..229
e-value: 6.1E-30
score: 103.7
NoneNo IPR availableGENE3D2.10.25.10coord: 409..444
e-value: 2.9E-7
score: 29.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 930..1006
NoneNo IPR availableCDDcd00054EGF_CAcoord: 412..443
e-value: 3.96125E-5
score: 41.4682
NoneNo IPR availableCDDcd00110LamGcoord: 235..380
e-value: 1.49652E-11
score: 62.4357
NoneNo IPR availableCDDcd00110LamGcoord: 27..198
e-value: 8.58923E-25
score: 101.726
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 408..444
IPR000742EGF-like domainSMARTSM00181egf_5coord: 409..443
e-value: 0.0058
score: 25.8
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 406..443
score: 17.046
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 250..382
e-value: 7.1E-13
score: 58.8
coord: 48..200
e-value: 1.1E-26
score: 104.7
IPR001791Laminin G domainPFAMPF02210Laminin_G_2coord: 258..381
e-value: 8.1E-11
score: 42.5
coord: 56..199
e-value: 2.4E-21
score: 76.5
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 229..404
score: 25.4
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 27..224
score: 34.821
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 408..443
e-value: 0.0065
score: 19.4
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 445..569
e-value: 2.1E-7
score: 30.5
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 26..224
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 223..407
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 437..484

Blast
[Close]
BLAST of TCONS_00019037-protein vs. Swiss-Prot (Human)
Match: CNTP2 (Contactin-associated protein-like 2 OS=Homo sapiens GN=CNTNAP2 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.744e-67
Identity = 188/643 (29.24%), Postives = 307/643 (47.74%), Query Frame = 0 
Query:   29 SFTGKQYIEYKIPARIDATSKDKITLKFRTIDASGVLLYSCGEEGDFLLLEMKRGKLVYTGNFGS--AGDTNDGVHQIIINKQYNDGKWHEVTLLRKEEEGETDDDPFQIFIHITVDDSTISKKPDGAFKQLNLDQSFLVGGLGNRQRLDRTCLDLNNRRNFTGCLQDVHFNSVNLLYGAKEMFRQFKVHG---GTLPFTCTLDYEIIGFHHEQSTL-VAKRNILKKNELKIAIQLRTFEPNGH-IFTHKSTD-GSAVLGLVKGKLQLTLSFLSLTQNDAATVKSNIKLDDGDWHNVEVTIKRNESEIFLNVDHEKK-RFKFPDHFELIEQF---GLLSSEVRFGGSTLQLPGLVSCFRKIQVDGAELSLKTGKNIKENSQKLIS-NVCQIRDLCFPSPCQHGSTCTQFRGNYQCNCAGTGYQGRQCQTCVYKRTCEEYKVAGETKSGNYKICPKNEHIFN---VYCDMKSGA--TIMKHSLKNDTQVSKGDQYDGGDHYYHSVNYQTSLDNIKEIVNVSLTCRQYIRYDCFKSHLLYGIGRLRAVHFKGARWVDKDSIIQHYWGGATPDSRKCACAMDGSCAQDANGYQHDCNCDVFDSTWRHDDGFITDKNRLPVLEMQFSKGKETDGKSFFTVGALKCYG 653
            +F G   + Y+   +   T KD I L F+T ++ GV+L+  G++GD++ LE+K+ KLV + N GS   G    G   ++     +D  WH V +   E +G +        I++T+D S    + +G F  L+LD     GG+    +   +     +R+NF GC++ +++N VN+     ++ R+ K+     G L F+C   Y +  F +  S L V  R  L ++   ++ Q RT+ PNG  +F+H + + G+  + L + K+ + ++ ++ T+     + S   L+DG WH V    K N + + ++ D     R   P   +  E++   G L+       S LQ P    C + IQVD   ++L      K  S   +S ++C I D C P+ C+HG  C+Q   +++C C  TGY G  C   +Y+ +CE YK  G+T S  Y I P          VYC+M      TI+ H L+  T V     Y+   +    + Y  S+D I  I + +  C QY+ Y C  S LL               WV K +   +YWGG+ P  +KCAC ++ +C       ++ CNCD     WR D GF++ K+ LPV ++          ++  +VG L+C G
Sbjct:  189 NFDGHVVLPYRFRNKKMKTLKDVIALNFKTSESEGVILHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIY-GHTSVMTGSLLDDHHWHSVVI---ERQGRS--------INLTLDRSMQHFRTNGEFDYLDLDYEITFGGIPFSGKPSSS-----SRKNFKGCMESINYNGVNI----TDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNATSYLEVPGR--LNQDLFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHIN-ITQTKMSQIDISSGSGLNDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQVKTGEKYFFGGFLNQMNNSSHSVLQ-PSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVSIDMCAIIDRCVPNHCEHGGKCSQTWDSFKCTCDETGYSGATCHNSIYEPSCEAYKHLGQT-SNYYWIDPDGSGPLGPLKVYCNMTEDKVWTIVSHDLQMQTPVVG---YNPEKYSVTQLVYSASMDQISAITDSAEYCEQYVSYFCKMSRLLN-----TPDGSPYTWWVGKANEKHYYWGGSGPGIQKCACGIERNCTDP----KYYCNCDADYKQWRKDAGFLSYKDHLPVSQVVVGDTDRQGSEAKLSVGPLRCQG 793
The following BLAST results are available for this feature:
BLAST of TCONS_00019037-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTP22.744e-6729.24Contactin-associated protein-like 2 OS=Homo sapien... [more]
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